Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04502 ATGAGCCGTGATGGTGGGGGTTGGATGGATGCTGCAAAGTTTTTGACTGGAGCATCGTCTGTGGGGAGCATAGCCATTCCTATAATCCTTAAGCATGCTCAAATGATAGAGACTGGAGCAATGCTCATTGAGCTAGTATCGTTCTTCATATTTATATGCACTGTTATGTGTTTCCACCAAGCTAGCCTTGACGACGATTGGTAA 204 0.4461 MSRDGGGWMDAAKFLTGASSVGSIAIPIILKHAQMIETGAMLIELVSFFIFICTVMCFHQASLDDDW 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04502 67 PANTHER LEPTIN RECEPTOR-RELATED 6 66 IPR007262 -
Trre13g04502 67 Pfam Vacuolar protein sorting 55 5 61 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04502 Trre-Chr13 52564225 52564654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04502 8 58 EF-hand Containing Proteins AT1G32410 52.941 4.91e-14 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04502 - - psat:127125618 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04502 13 52564225 52564654 Trre13g04502 13 52564225 52564654 ECH