Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04499 ATGGACCCCACACCATCATTCAACCGCCGTTTTCCTCCCTCCTCCGACCGCCTACTCGGTGCTTTCAATTTCTCCCCTTCCTCCACCGTCACAAACTCCGCCGCCGATGAACTAACCGAAGCTGAACTCTTCAATTGGTCTTCCGACGGTTCCGAATCTGAAAATCAACGTCCACGGCCTCAACCGACAGAGCTTATTCGTCACCGGAGTTTCGATCTATCTCAAGACTCCGGTATTCTTGCTGTGTTAACAGGTCCTGACAACCGCCGCGGTGATTCGCCTGTGTTTCGTGGTAAATCTCCTGTTTCATCTTCGAGAATGATTCCTTCGTTTCCGAGACCGAGACCTTATAACTCTGAAAACGTGATTCAGTCAATGCCTTCTAGAAAGTTCCAACAATCGGCTCCCGTGAAGGTTCCGATTATGCCTCCGAGTCAATTCTCGAGACGGCGGAACTTTGATGCGCTTGCAGTGCTGGACGACGATGACGACGACGGTGACGAGGAGTTATTGCCGCCGCATGAGATTGTAGCGAGAGGCTCAGGAGTTTCGCCGAGAACTACTTTTTCGGTTCTGGAAGGAGTTGGAAGAACTCTCAAAGGGAGAGATCTTCGTCAGGTTCGAAACGCTGTTCTGCGCCAAACCGGTTTTCTTGATTAA 660 0.5091 MDPTPSFNRRFPPSSDRLLGAFNFSPSSTVTNSAADELTEAELFNWSSDGSESENQRPRPQPTELIRHRSFDLSQDSGILAVLTGPDNRRGDSPVFRGKSPVSSSRMIPSFPRPRPYNSENVIQSMPSRKFQQSAPVKVPIMPPSQFSRRRNFDALAVLDDDDDDGDEELLPPHEIVARGSGVSPRTTFSVLEGVGRTLKGRDLRQVRNAVLRQTGFLD 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04499 219 PANTHER EXPRESSED PROTEIN 31 218 - -
Trre13g04499 219 MobiDBLite consensus disorder prediction 84 116 - -
Trre13g04499 219 MobiDBLite consensus disorder prediction 44 60 - -
Trre13g04499 219 Pfam Senescence regulator 37 219 IPR007608 -
Trre13g04499 219 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04499 Trre-Chr13 52537773 52538432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04499 - - gmx:100799522 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04499 13 52537773 52538432 Trre13g04499 13 52537773 52538432 ECH