Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04481 ATGACAGGGAAAAGGAGAAGGAAGACGAAATCGGTAAGCAATAAAATCACAGACAAAAAAAGAGCTGCTGCTGAGGTGAAAAGTGACAATTTGGAGCTGCAATCCTGGGCCAATCTCCCTACCGAACTCTTAGAATTGATCTTATCTCGTTTGGTCGTGGCGCATAATATTCGTGCTTCAGTTGTTTGCAAGAGATGGCATTCAGCTGCCAGTTCTGTACGTGTAGGGGACCAATCACCTTGGCTTATGTATTTCCCAAAAACTGATGACTGTTATGACTTCTATGACCCTGTGCATCGTAAGATTTATTCTCTTGAGTTTCCAGAGTTGGATGACTGTCGTGTTTGCTATACAAAGGATGGTTGGTTATTGCTATGCCAGAAGCAGTGGGCCATAAATCCCCGTTTTTTTCTTTTTAATCCCTTTACTAGGGAGCGGATCCAGCTGCCAATACGTGAAGACAGACACTCAATTGCTGGCTTCTCTTGTGCTCCTACATCAACTGGATGTGTTATATTAACTGTTGATTATATTAGTTCTTATGTTGTAGCTATTAGCACATGTTATCCTGGGGCAGATGAATGGACAACTGTTAATTACGAAAACCGCCCAGAATTTTTCGGGAGCATATGGAATAAGCTTGTCTTTTGTAATGGGTTATTTTATTGTCTAAGCCTCACAGGTTGGCTAGGGGTGTTTGATCCACTTGAATGTACTTGGAGTGTTCTGGAAGTACATCCGCCAAAATGCCTAGTAGAGGGTTTTATTGCTAAAAATTGGTCAAAAGAAAAATTTATGATAGAGCACAAAGGGAATATATTTCTAGTTAATGTATGTTGCGGTGATAACCCGATTGTATTCAAGTTAGATCAGACACAAAAGGAATGGAAAGAGGTGACAACGCTAGATGGAGTGACACTTTTTGCAAGTTTTATGTCATCTCATTCTAGGACGTACGTCACTGGATTAATGAGAAACAGTGTCTACTTCTCTAAAGTCCGTTTCTATGGAAAGCGTTGCATATCATTCTCTCTTGATGACCATAGATATTATCCCAATAAGCAATGTCGTGACTGGGTAGAATGGGATGCTTTTGAGAATATCTGGATTGAACCACCAAAAGACTTTGCTGGCTGGAACTAA 1143 0.4051 MTGKRRRKTKSVSNKITDKKRAAAEVKSDNLELQSWANLPTELLELILSRLVVAHNIRASVVCKRWHSAASSVRVGDQSPWLMYFPKTDDCYDFYDPVHRKIYSLEFPELDDCRVCYTKDGWLLLCQKQWAINPRFFLFNPFTRERIQLPIREDRHSIAGFSCAPTSTGCVILTVDYISSYVVAISTCYPGADEWTTVNYENRPEFFGSIWNKLVFCNGLFYCLSLTGWLGVFDPLECTWSVLEVHPPKCLVEGFIAKNWSKEKFMIEHKGNIFLVNVCCGDNPIVFKLDQTQKEWKEVTTLDGVTLFASFMSSHSRTYVTGLMRNSVYFSKVRFYGKRCISFSLDDHRYYPNKQCRDWVEWDAFENIWIEPPKDFAGWN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04481 380 Pfam F-box-like 36 71 IPR001810 GO:0005515
Trre13g04481 380 Gene3D - 35 75 - -
Trre13g04481 380 PANTHER OS09G0392200 PROTEIN 19 374 IPR044619 -
Trre13g04481 380 SMART fbox_2 39 79 IPR001810 GO:0005515
Trre13g04481 380 SUPERFAMILY F-box domain 35 93 IPR036047 GO:0005515
Trre13g04481 380 ProSiteProfiles F-box domain profile. 33 84 IPR001810 GO:0005515
Trre13g04481 380 CDD F-box_SF 37 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04481 Trre-Chr13 52373282 52375754 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04481 - - gmx:100796538 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04481 13 52373282 52375754 Trre13g04481 13 52373282 52375754 ECH