Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04478 ATGGGTTGCGTTTCCTCAAAACACATCAAAAAAGACATCAACAAAGAAAAAAATGGTTACATTAACATTAACCATGTTGTTTCTCTCACTTCCTCAACCTTAGGAGCACTCAAACTAGACAACAACAACAACAACAATGATTCATTCAATTCCATTGTTGTTTCAGAAACAGAGTCAAAAACAGAGCAAAAAACAGAGTCTGAAACAGAGTCGAAATCAGACCCATCACCACAACACAAAGACCCAGAAACTGTTATCAACATCAATGCTTGGGAACTCATGGAGGGTCTTGAAGAAGGAGTACCCATTTCAAATCTTCCCAAGAAAAGTCCAAAGTCTGCACCTTTTCTTCGTGGGTTTATGGCTTCTGATACAAGAAGTCCTTTGAAGTTTCTTAATCAATTTGGATCACCAAAAACCTCACTCAAGAAATCTTCAGGGAAAGAAAATAAGGTTCAAGTTAATAATTTGGTAAGAGGTGGTGTTAGACGTTTGGATTATAGTCCTAAGGGAATTCTCAAACCCTCCACTGCAAATTCTTCTCCTAAGAATTCGAGTTTTTCGCTAAAAGGATCTCCGCTTTCGGCAAGAAGAAACAGTTTTGGGAATGATAGTGTGAGAAAAAGTCCAAGTCCTTTGTTTGATCCAGAGATTATTGCTTCTTATGAAAAGGAACTTTCTGAAGAGGAAGAACAAATCAAAAGAATTGTTTTCGCTACTCCAAAAACACGAAGAGCGAGAAAATCTCTTGATTCAGTTGCATTTTTGAATTTGTTTGAGAAAAACTGTCCTCCTGGAGGAGAAAATTCTGTTGTAATTTACACTACAACATTGAGAGGAATTAGAAAGACATTTGAAGATTGTAACAAAGTTCGATCGATTATTGAATCGTATTGTGTTTGTGTTCGCGAGCGCGATGTGTCTATGGATTCCGGTTTTAAGGAGGAATTAAAGAAGCTTATGGGAATGAAACGAGTTCAAGTTCCTGTTGTGTTTGTGAAAGGAAGGTTTATTGGAGGTGTTGATGAAATTGTGAAATTGGAAGATGAAGAAAAATTGGGTGTTCTTTTAGAAGGGATTCCAAAGGCATTAGGAGTTTGTGAAGGGTGTGGAAGTTTGAGGTTTGTGATGTGTAAGGAATGTAATGGAAGTTGTAAGGTTTTGGATGAGAAGCAAAAGAAAACGGTTAAGTGTGGTTATTGTAATGAGAATGGAACAATTCGTTGCTCTCTATGTTGTTGA 1242 0.3712 MGCVSSKHIKKDINKEKNGYININHVVSLTSSTLGALKLDNNNNNNDSFNSIVVSETESKTEQKTESETESKSDPSPQHKDPETVININAWELMEGLEEGVPISNLPKKSPKSAPFLRGFMASDTRSPLKFLNQFGSPKTSLKKSSGKENKVQVNNLVRGGVRRLDYSPKGILKPSTANSSPKNSSFSLKGSPLSARRNSFGNDSVRKSPSPLFDPEIIASYEKELSEEEEQIKRIVFATPKTRRARKSLDSVAFLNLFEKNCPPGGENSVVIYTTTLRGIRKTFEDCNKVRSIIESYCVCVRERDVSMDSGFKEELKKLMGMKRVQVPVVFVKGRFIGGVDEIVKLEDEEKLGVLLEGIPKALGVCEGCGSLRFVMCKECNGSCKVLDEKQKKTVKCGYCNENGTIRCSLCC 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04478 413 MobiDBLite consensus disorder prediction 168 209 - -
Trre13g04478 413 CDD GRX_GRX_like 270 409 - -
Trre13g04478 413 MobiDBLite consensus disorder prediction 59 79 - -
Trre13g04478 413 MobiDBLite consensus disorder prediction 173 207 - -
Trre13g04478 413 SUPERFAMILY Thioredoxin-like 263 358 IPR036249 -
Trre13g04478 413 ProSiteProfiles Glutaredoxin domain profile. 259 364 - -
Trre13g04478 413 Gene3D Glutaredoxin 264 359 - -
Trre13g04478 413 Pfam Glutaredoxin 271 338 IPR002109 -
Trre13g04478 413 Coils Coil 219 239 - -
Trre13g04478 413 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 24 413 - -
Trre13g04478 413 MobiDBLite consensus disorder prediction 55 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04478 Trre-Chr13 52341207 52342448 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04478 K17479 - gmx:100781497 508.834