Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04467 ATGAAAGGAAACAACAACCTTTTAATAATGTCTCACCAATCCTCAGCTGAATCTGATGACAATATTCCTTCTCATCCATTGGACATAAAAGTTCTTCCCCACTCATCTAAAGATCATGTCAACAACTTTGAAAAAGAACAAGAAAACCCTTTTTTATTGAACACCCAAAAGAGCCAAAACCATGATGATGAGGAAGATAAAGATGCAACACAAAACTCATCACTTGTTTGCAACAAGGATAAAGATGTTGAAGCAAAAGAGTTAATAACAAGTGTGGAAGAAGAGAGTGAAAGAGAGAGGTTGAAAAGGCATAGAGTTGAAGTAGCTGGAAGTGTTTGGATACCTGAAATATGGGGTCAAGAGGATTTATTGAAGGATTGGATAGATTGCACTGCATTTGATGCTCCTTTAGTTCCAAGTAAGATCACTATGGCACGTGCTGCTTTGGTTCAAGAGGGTACTACTAAAACCAATGCTGCTCCTCTAAGTATAGACAACAGGTGTTAG 507 0.3787 MKGNNNLLIMSHQSSAESDDNIPSHPLDIKVLPHSSKDHVNNFEKEQENPFLLNTQKSQNHDDEEDKDATQNSSLVCNKDKDVEAKELITSVEEESERERLKRHRVEVAGSVWIPEIWGQEDLLKDWIDCTAFDAPLVPSKITMARAALVQEGTTKTNAAPLSIDNRC 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04467 168 MobiDBLite consensus disorder prediction 1 21 - -
Trre13g04467 168 MobiDBLite consensus disorder prediction 1 77 - -
Trre13g04467 168 PANTHER PROTEIN BIC1 34 168 IPR040374 GO:0009785
Trre13g04467 168 CDD BIC1_CID 101 153 - -
Trre13g04467 168 MobiDBLite consensus disorder prediction 31 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04467 Trre-Chr13 52260378 52260884 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04467 - - tpra:123890389 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04467 13 52260378 52260884 Trre13g04467 13 52260378 52260884 ECH