Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04463 ATGGAGAATCTTCCTGTTGAAGTAATTGGTATGATATTATCCAATCTTGGGTCTGCTAGGGATATTGTGATTGCATCTTTAACTTGCAAAAAATGGAAAGATGCTTGGCACAATCATCTCCATACTCTTTCTTTCGATACTCGTGATTGGCACCTATATCGCGAAATTTGTTCTAATCACTTGGAAATAGTTATCACCTGTACACTTTTTCAAACTAAAGGATTGCAGTGCTTAACAATTTTCATGGATGATGATCATACATTTCATGTTACCTCTGTCATTGCTTGGCTTATGTATACAAGGGATTCTTTGCGCCAGCTGCGTTATAATGTGAGAACATTCCCTATTTTCAATATCATTGATATACTCAGCAGGCAAAGATTGGAAGTTTTGTCCTTGGCTCGTAACCCTATCTTGCATGTTGACCCGAGGTATCACAAATTTCCTTGCTTGAAGTCACTGTCGTTGAGTTTTGTTAGTATATCGGCGTTGGATTTGAGTCTTCTGCTTTCTGCATGTCCGAAACTTGAAACTTTTTCTTTAGTTAGTCGAGATATCGTTATGTCCAATTTGCAGGCTTCCATAGAGCTCAGCAGCTCTTCTTTGAAAGATTTCTCTATCGAGTCATATGATGTCGATAGGTTCATATTGGAAGCGGATTCACTCGAGAATCTACATCTGAAAGACTGTACCTTTAAGGTTTTCAAATTGGTCGGTAAGGGGACGTTGAAAGTCTTGAAGATCAATGACGTGAGTGTTATCCATCTCGACATTGGGGATAGTACAGAGAAACTCGAGATTGTAGATGTTTCGCACTTCACAATTTTATGGCCAGAATTTTATAAGATGATATCGAAAGCGTCGAATTTAAAAAAGCTTAGACTGTGGAGTGTTGTTTTTGATAATGAGGATGAGGTTGTTGATATAGAGACCATTTCTGCTTGTTTTCCAAGACTAACACACCTTTCCCTAAGTTATGATCTAAAAGATGGAGTGCTTCATTATGGCTTGCAGGGTTTATCTTCTCTTATGAATGTGGTTGTGTTAGAACTTGGATGGACTACAATCAGTGATCTTTTCTCAGTTTGGGTAGCTGGACTTTTAGAAGGATGTCCTAATCTAAAAAAGTTGGTCATTTATGGTTATATTGCTGAGGCTAAAACACATGAAGAGCTTCAAACTTTTGCTAGATTTTCTGAATTCATGCTTCAACTAGGAAGAAAATATAGTCATATAAAGTTTGATTTTGTTTATGAGTAG 1260 0.373 MENLPVEVIGMILSNLGSARDIVIASLTCKKWKDAWHNHLHTLSFDTRDWHLYREICSNHLEIVITCTLFQTKGLQCLTIFMDDDHTFHVTSVIAWLMYTRDSLRQLRYNVRTFPIFNIIDILSRQRLEVLSLARNPILHVDPRYHKFPCLKSLSLSFVSISALDLSLLLSACPKLETFSLVSRDIVMSNLQASIELSSSSLKDFSIESYDVDRFILEADSLENLHLKDCTFKVFKLVGKGTLKVLKINDVSVIHLDIGDSTEKLEIVDVSHFTILWPEFYKMISKASNLKKLRLWSVVFDNEDEVVDIETISACFPRLTHLSLSYDLKDGVLHYGLQGLSSLMNVVVLELGWTTISDLFSVWVAGLLEGCPNLKKLVIYGYIAEAKTHEELQTFARFSEFMLQLGRKYSHIKFDFVYE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04463 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Trre13g04463 419 PANTHER F-BOX PROTEIN-LIKE 2 323 - -
Trre13g04463 419 Pfam F-box-like 2 38 IPR001810 GO:0005515
Trre13g04463 419 SUPERFAMILY F-box domain 2 63 IPR036047 GO:0005515
Trre13g04463 419 Gene3D Ribonuclease Inhibitor 124 397 IPR032675 -
Trre13g04463 419 CDD F-box_SF 2 35 - -
Trre13g04463 419 SUPERFAMILY RNI-like 71 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04463 Trre-Chr13 52234115 52235374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04463 - - gmx:100792331 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04463 13 52234115 52235374 Trre13g04463 13 52234115 52235374 ECH