Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04460 ATGGAGAAAGAATTCAAAGTCCCACCAGTATCATTCGCATCCGCCGGAAACCCCAATATCGCCGGTCAAAATCTTCAAAACCGCCGTGTACCAACACCGCCGTTTCAACCTAACTCCGGAATCCCTTTCATGTCATTCGACATAGGTTCCGCCGCCGTATCAACCTCCTCCGGTCCAATTTACTCCGGTCCTGGCATCGGTGGTGGTTCCGCTAATTTCGACGACGAGGAACCTCTTCTCGACGAGCTCGGTATCCATCCAGAACAAATCTGGAGCAAAATCAGATCGGTTCTTAATCCGTTTCGTGTGAATCACACTGTGCACAAAGACGCTGATCTATCTGGTCCTATTCTTCTCTACATGGCTTTTTGTCTCTTCCAATTACTCGCCGGAAAAATTCAATTCGGTGTGATTTTAGGGAGGTTTCTTTGGACTCGCCATTGCGGCGATATTCGTGTTGTGGGCAACGAGGGCTTCGACTGGTTTGGTGGTTTCTCTTACTGA 504 0.4881 MEKEFKVPPVSFASAGNPNIAGQNLQNRRVPTPPFQPNSGIPFMSFDIGSAAVSTSSGPIYSGPGIGGGSANFDDEEPLLDELGIHPEQIWSKIRSVLNPFRVNHTVHKDADLSGPILLYMAFCLFQLLAGKIQFGVILGRFLWTRHCGDIRVVGNEGFDWFGGFSY 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04460 167 PANTHER GOLGI MEMBRANE PROTEIN YIP1 71 141 IPR045231 GO:0006888
Trre13g04460 167 MobiDBLite consensus disorder prediction 1 31 - -
Trre13g04460 167 MobiDBLite consensus disorder prediction 16 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04460 Trre-Chr13 52187504 52188162 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04460 K20363 - gmx:100775605 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04460 13 52187504 52188162 Trre13g04460 13 52187504 52188162 ECH