Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04456 ATGAGAATATCATGGATAACAGAAAGCCCAACAGCAGCAAAAGTGGAATACGGCCCATCTCCTTCAGCAATCTCATTTTCTGCAACTGGAACCACTTCTTCTTACCATTATGCTCTTTATGAGTCTGGTGAAATTCACAATGTCCTAATTGGTCCCCTCAAGTCCAACACAGTTTACTACTACCGTTTGGGTGACTCAACCAAAACATACAATTTTAAGACTACACCCTCTCAATTTCCTATCAAGTTTGGAGTAGTTGGAGATCTTGGACAAACAGAGTGGACAGTTTCAACATTGAATCATTTAAGTAAATCAAATTACGACATGTTATTATTACCGGGGGACTTATCCTATGCAGATTTTGTACAAAATCTATGGGACTCTTTTGGTCGTTTGGTTGAACCATTGGCAAGTCAACGTCCATGGATGGTCACAACAGGGAACCATGATGTTGAGAAGATTCCAGTCATCCACAGAACACCATTCACAGCATACAATACAAGATGGCAAATGCCATTTGAAGAAAGTGGATCAGACTCTAACCTTTACTATTCTTTTGATGTATCTGGTGTTCATGTTATCATGTTGGGATCTTATACCGATTTCGACCCTGAATCTTCGCAATACAAATGGCTTCAAGGTGACTTGAAGAAGATAAACAGAGGAAAAACTCCTTGGGTAGTGGTGTTGATTCATGCTCCATGGTATAACTCTAATGAAGCTCATCAAGGTGAAGCTGAATCCGTTAACATGAAAACTTCTATGGAAGATTTGCTCTATAATGCTCGCGTTGATGTTGTTTTTACCGGTCACGTCCATGCCTATGAACGCTTTACACACGTTTATAAAGACAAAATCGACAATTGTGGTCCGGTGCATATTACCATTGGGGATGGGGGCAATCGCGAAGGTTTAGCCACCCGTTACCAAGAACCTAAACCGGAGATATCAATATTCAGAGAGGCTAGCTTTGGACATGGGATATTAGAGGTGGTTAATGCATCACATGCACTTTGGAGTTGGCATAAGAATGATAATGAGGAACCAGTTATTAGTGACTTTGTTTGGCTAGCAAGCCTCTCTTCTACTCCTGCATGTAAAGTGTGA 1107 0.4074 MRISWITESPTAAKVEYGPSPSAISFSATGTTSSYHYALYESGEIHNVLIGPLKSNTVYYYRLGDSTKTYNFKTTPSQFPIKFGVVGDLGQTEWTVSTLNHLSKSNYDMLLLPGDLSYADFVQNLWDSFGRLVEPLASQRPWMVTTGNHDVEKIPVIHRTPFTAYNTRWQMPFEESGSDSNLYYSFDVSGVHVIMLGSYTDFDPESSQYKWLQGDLKKINRGKTPWVVVLIHAPWYNSNEAHQGEAESVNMKTSMEDLLYNARVDVVFTGHVHAYERFTHVYKDKIDNCGPVHITIGDGGNREGLATRYQEPKPEISIFREASFGHGILEVVNASHALWSWHKNDNEEPVISDFVWLASLSSTPACKV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04456 368 CDD MPP_PAPs 77 357 IPR041792 -
Trre13g04456 368 SUPERFAMILY Purple acid phosphatase, N-terminal domain 1 76 IPR008963 GO:0003993|GO:0046872
Trre13g04456 368 Pfam Calcineurin-like phosphoesterase 82 275 IPR004843 GO:0016787
Trre13g04456 368 Pfam Iron/zinc purple acid phosphatase-like protein C 290 347 IPR025733 -
Trre13g04456 368 SUPERFAMILY Metallo-dependent phosphatases 80 347 IPR029052 -
Trre13g04456 368 Gene3D - 78 366 IPR029052 -
Trre13g04456 368 Pfam Purple acid Phosphatase, N-terminal domain 1 74 IPR015914 GO:0003993|GO:0046872
Trre13g04456 368 PANTHER ACID PHOSPHATASE RELATED 1 358 IPR039331 GO:0003993
Trre13g04456 368 Gene3D - 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04456 Trre-Chr13 52141974 52143857 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04456 47 348 Miscellaneous Gene Families AT2G03450 27.747 4.87e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04456 K22390 - gmx:100794764 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04456 13 52141974 52143857 Trre13g04456 13 52141974 52143857 ECH