Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04451 ATGAATACTCTAGTCAACAACGTTAACGGTTTCGTCAACGGTGTAGTTCGAAACGCTGAGAAGCTCATTATCGATACTGACCCTGGGATCGATGATAGTATGGCGATTTTAATGGCATTTCGTTGTCCTGAAGTGGAGGTGGTAGGTTTGACAACTGTTTTTGGTAATGCTGCTACTGAAGATTCTACACGTAATGCTTTGCTTTTGTGTGAGATCGCAGGCCGTGGAAATGTTCCTGTTGCAGAAGGAAGTACTGAGCCATTAAAGGGTGGAAGGCCTCGGGTAGCTGATTTTGTTCATGGTAAAGATGGATTGGGGAATATATTCCTACCTGATCCTAAAGCTAATAAAATTGATAAAAGTGCTAGTGAGTATTTGGTGGAGAAGGTCTCTCAATATCCTGGTGAAATAACTGTTTTAGCACTTGGACCACTTACTAACATTGCTCTAGCAATCAAAAGAGATTCTTCTTTTGCAAGCAAGGTGAAGAAAATAGTTGTACTTGGTGGTGCATTCTTTGCCTTGGGGAATGTTAATCCGGCTGCAGAAGCAAATATATATGGAGACCCAGAAGCAGCAGATATTGTGTTTACCTCTGGGGCAGATGTTGTTGTTGTTGGAATAAACATCACAACCCAAGTGCAATTGACAGATGCTGACCTCCTTGAACTGAAGGAATCAAAAGGAAAGCATGCAGCTCTTTTAAGTGAAATGTGCAAATTCTACAGAGATTGGCATGTAAAATCAGACGGCGTCTATGGAATTTTCCTCCACGACCCCGTTAGTTTTGTGGCAGTTGTGCGTCCTGATCTTTTCACATACAAGAAGGGAGTAGTGAGGGTAGAGACACAAGGCCTTTGTGTTGGACATACACTTATGGACCAAGGACTAAAAAGATGGAATACAAGCAACCCATGGACGGGTTATTCTCCTATTTCAGTCGCTTGGACTGTGAATGTTGATGGAGTTCTTAATTACATTAAGGAGCTGTTGATGAAACCCTGA 1005 0.4209 MNTLVNNVNGFVNGVVRNAEKLIIDTDPGIDDSMAILMAFRCPEVEVVGLTTVFGNAATEDSTRNALLLCEIAGRGNVPVAEGSTEPLKGGRPRVADFVHGKDGLGNIFLPDPKANKIDKSASEYLVEKVSQYPGEITVLALGPLTNIALAIKRDSSFASKVKKIVVLGGAFFALGNVNPAAEANIYGDPEAADIVFTSGADVVVVGINITTQVQLTDADLLELKESKGKHAALLSEMCKFYRDWHVKSDGVYGIFLHDPVSFVAVVRPDLFTYKKGVVRVETQGLCVGHTLMDQGLKRWNTSNPWTGYSPISVAWTVNVDGVLNYIKELLMKP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04451 334 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 20 333 IPR023186 -
Trre13g04451 334 Gene3D - 13 334 IPR036452 GO:0016799
Trre13g04451 334 Pfam Inosine-uridine preferring nucleoside hydrolase 22 323 IPR001910 GO:0016799
Trre13g04451 334 CDD nuc_hydro_CaPnhB 21 331 - -
Trre13g04451 334 FunFam Probable uridine nucleosidase 1 15 334 - -
Trre13g04451 334 SUPERFAMILY Nucleoside hydrolase 21 331 IPR036452 GO:0016799
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04451 Trre-Chr13 52106196 52109088 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04451 K01240 - gmx:100787563 561.607