Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04422 ATGAGAGGTATAACATCTTGTTACAATGAACATGCCATTAGAGTTTCTGATTTATATTGTTCAAGGCCTTCAAATTCAAATCATTCTTATATTGTTCCAAAATTCAATAACCCTTCAATTCAAAATTCAGTTACAAATACATATAAACTCAATCATCATAAACAATTTCTCATAACTTTAACTTGGACCAAGAAACTCATTTCTCAAGGTTTCATCATAAATATCACAAATAACAACACTTTTTCTGATTCTGATTCTGTTTCTGTTTCTAGTTCTAGTTCTAGTTCTGGTTCTGATTATGTTAATGCTATCTCAAAGTTTAATTCAAATCTTCCTCTGTTATTGACAAAAAACAGAGGAACTGAAACTTTTCAATTTCAAAACTTTGAAGTTAAACTCTTATGGGATCTTTCTGAAGCTAAATATGAAGAAGGACCTGAACCGGCTAATGGGTTTTACGTTATGGTTTTGGTGAATTCTGAATTGGGTCTTTTCCTTGGAGATAAAGAAGAAGAATCATTGAAGAAAAATCATGGAGCAAAATTCTCAATGGTTTCAAGAATTGAAAGATTTTCTGGTACAAGTGTTTATGCAACAAAGGCAAAGTTTTCTGAAATTGGAAATTCCCATGAGATATTGATAAAGTGTGGTGTTGAAGATGAAGGATCAAAGAGTAACGTGTTATCTTTATTTATGGATAAGAAAATGGTGTTTAAAGTTAAGAGATTGAAGTGGAATTTTCGTGGGAATCAAACAATTTTTGTGGATGGTTTAGTTGTTGATTTGATGTGGGATTTACATGATTGGATTTTCAATCTTAGTGATGATAATAATAACTCTGATTCTGCAGTTTTTTTGTTTAGAACAAGGAGTGGTTTGGATAGTAGATTATGGTTGGAAGAGAAGAATTTGCAGAAGCAAAAGGAACAAGATAGAATTGGATTCTCTTTGTTGATATGTGGATGTAAGAAACCTAATTGA 981 0.3119 MRGITSCYNEHAIRVSDLYCSRPSNSNHSYIVPKFNNPSIQNSVTNTYKLNHHKQFLITLTWTKKLISQGFIINITNNNTFSDSDSVSVSSSSSSSGSDYVNAISKFNSNLPLLLTKNRGTETFQFQNFEVKLLWDLSEAKYEEGPEPANGFYVMVLVNSELGLFLGDKEEESLKKNHGAKFSMVSRIERFSGTSVYATKAKFSEIGNSHEILIKCGVEDEGSKSNVLSLFMDKKMVFKVKRLKWNFRGNQTIFVDGLVVDLMWDLHDWIFNLSDDNNNSDSAVFLFRTRSGLDSRLWLEEKNLQKQKEQDRIGFSLLICGCKKPN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04422 326 PANTHER EXPRESSED PROTEIN 4 323 IPR008586 -
Trre13g04422 326 Pfam Plant protein of unknown function (DUF868) 40 323 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04422 Trre-Chr13 51768714 51769694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04422 1 319 EF-hand Containing Proteins AT5G28150 32.716 5.10e-48 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04422 - - pvu:PHAVU_001G186900g 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04422 13 51768714 51769694 Trre13g04422 13 51768714 51769694 ECH