Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04374 ATGAAGCTCTTGGAAAAGGATTTTGTTCTAAATCAAAGAGGAAGTGTTAAAATTATTGCAGAAGAGCCGGATGATGTTTGGCTCCTTTATAACCTCATCACCATCGGCGATGTTGTCACCGCCGATACCACACGGAAAGTCCACCTTGAATCAAATAAAAACACTGCATCACGTGTTAAACTCAACCTTCATCTCAAAGTCACATGTCGTGACTTTCACAAAGACTCGTCTACCCTTCGTGTTCATGGTCGCAACCTTGAATCAAATCAACATGTCGCTGCTGGCTCCTTCCACACTTTAACCCTTGAAAGAAACAAACCGTTTGACCTTCAAAAAAAGTTGTGGGGTCCAAATGCCGTTGAAGCCTTAGCCGATGCCACCGAGAATAATAATTCTTCTTCGTTCGATGCCAATCTAGCCATTGTTGTTATTCAACCACACCAAGCAGAGATTCACTTGCTTGGCAAAGGGGTCACCAATTGTTGCTCCAAGATCGAAGCATCTTCACGTTTACATTCACATAAAAAATCATCTTCCTCGTCTAACGTGTTTTTTCGTGATGTTTTTGCAGCTTTTGTGAAGAATGTGGATTTCAAAGTTGTGCGAAGTGTAGTGATAGTAGGGGATAACGATGATAATGCATCATTATCCCCAACTACTTTTCGCAGGTTTCTTTTGTCAGAAGCAAAAAAGTCAAGAATGAGGTGTATCGAAGAGAACAAGTCACGTATCGTCGTTGTGGGGTCAAAGTGTAATAACAACAAGGGTAATTATGATTTTGATATGAGGGAAGTTTTGAATGACATGGCAGTGATGAATTTGATAAAGGACAGCAATTTGGGCTTAGAGATTAGAACTTTTAAGGAATTGTGGGACATGGTGTGTAACAATTCAGATCGTGTGTGCTATGGACCAAAACATGTGGAGAATGCACATGAGATGAAAGCAATTGAGACACTTTTAATAAGTGATGATTTATATAAGAATGAAGAGATTGATACTAGGAAAAAATATGTGAGTTTAGTGAAATCAGTGAAAGAAGGTGGAGGAAAGGCATTGGTGTATTCTTCTATGCATGTTTCAACACCACAATTGGCTCAATTAACTGGTGTTGCTGCCATTCTTAGATTTCCATTGCCTGGTCTTCAAGATATGGATGATATTGATGATCATGCTTAG 1179 0.3953 MKLLEKDFVLNQRGSVKIIAEEPDDVWLLYNLITIGDVVTADTTRKVHLESNKNTASRVKLNLHLKVTCRDFHKDSSTLRVHGRNLESNQHVAAGSFHTLTLERNKPFDLQKKLWGPNAVEALADATENNNSSSFDANLAIVVIQPHQAEIHLLGKGVTNCCSKIEASSRLHSHKKSSSSSNVFFRDVFAAFVKNVDFKVVRSVVIVGDNDDNASLSPTTFRRFLLSEAKKSRMRCIEENKSRIVVVGSKCNNNKGNYDFDMREVLNDMAVMNLIKDSNLGLEIRTFKELWDMVCNNSDRVCYGPKHVENAHEMKAIETLLISDDLYKNEEIDTRKKYVSLVKSVKEGGGKALVYSSMHVSTPQLAQLTGVAAILRFPLPGLQDMDDIDDHA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04374 392 Gene3D Pelota, domain A 1 129 IPR038069 -
Trre13g04374 392 SUPERFAMILY Translational machinery components 135 278 - -
Trre13g04374 392 PANTHER PELOTA 1 386 IPR004405 GO:0070481|GO:0070966|GO:0071025
Trre13g04374 392 SMART eRF1_1_2 1 128 IPR005140 -
Trre13g04374 392 Pfam eRF1 domain 3 284 379 IPR005142 -
Trre13g04374 392 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 127 IPR038069 -
Trre13g04374 392 Gene3D eRF1 domain 2 137 275 IPR042226 -
Trre13g04374 392 Gene3D - 277 392 IPR029064 -
Trre13g04374 392 FunFam Protein pelota homolog 1 129 - -
Trre13g04374 392 FunFam Protein pelota homolog 280 392 - -
Trre13g04374 392 Pfam eRF1 domain 1 1 126 IPR005140 -
Trre13g04374 392 SUPERFAMILY L30e-like 283 383 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04374 Trre-Chr13 51371116 51372294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04374 K06965 - gmx:100803618 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04374 13 51371116 51372294 Trre13g04374 13 51371116 51372294 ECH