Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04346 ATGGCCTCTTCAATCTCAATTCCCGCACCAGAAGCAATCAATGTTCTCCTATCATTACTCAATGATGATTCTTCCTCCGTTAGAGAATCCTCCATGTCCTCTCTCAAAGACCTCGCTGCACTAAATCCTGTTCTTGTTCTAGAGTGTTGTGCAACTGTTTCACGCGGTGGACGTAGGCGATTTGGAAATATGGCTGGTGTTTTTCAAGTTATGGCGTTTGGAGTTCGAGCTCTCGATGAAAGAGATGTTGATTCTGCTTTCATGGCAAAACTTGCTAAGATTGCTACTTCTGAGATGATATCCTCCAAGGAACTCAATTCTGACTGGCAACGAGCAGCAACAAGCCTACTTGTTGCGATAGGGTCACATTTACCTGATCTTGTGATGGAAGAAATTTTTCTTCATTTATCTGGGACAAGTTCAGCATTACAGGCTATGGTTCAAATCCTTGCAGAATTTGCCTCTAGTAGTCCCTTGCTGTTCATTCCCCGCTGGAAAGGTGTACTTTCACGAATTTTGCCAATTCTTGGAAATGTGCGAGACATGCACCGGCCAACGTTTGCAAATGCTTTCAAGTGTTGGTGTCAAGCTGCTTGGCAATATAGTACAGATTTTCCTTCACATTTACCACAGGATGGTGATGTCATGTCATTTCTAAATTCTGCTTTTGAGCTTTTGTTAAGAGTTTGGGCAGCTTCACGGGACCTAAAGGTTCGTGTAGCATCGGTTGAAGCACTTGGGCAAATGGTTGGTCTCATAACACGGACACAATTAAAAGCAGCCTTACCAAGGCTTGTACCTACAATATTGGATTTGTATAAAAAGGATCTCGACATTGCTTTTCTAGCTACATGCAGTCTCCACAATCTGTTGAATGCCTCTTTACTGTCTGAAAGTGGCCCTCCTATGCTTGATTTTGAGGATTTGACTCTTACTTTAGCGACACTTCTGCCCGTGGTTTCTATGAATAGTGAAAACAAAGATCAAACAGATTTCTCTGTGGGATTGAAGATGTATAATGAGGTGCAGCATTGCTTTCTGACGGTTGGATTGGTGTATCCCGATGATTTGTTTTTGTTCCTTGTAACCAAATGTAGGTTGAAGGAAGAAGCAGCAACTTTTGGCGCGCTTTGTGTTTTGAAACATCTTTTACCGAGGCTATCTGAAGCTTGGCATAGTAAAATACCTCTACTGGTTGAAGCTGTAAAGTCCTTGTTAGAAGAGCATAATTTAGGTGTTCGAAAGGCACTTTCTGAGTTAATTGTGGTTATGGCTTCGCACTGTTACTTGGTTGGTTCATCTGGAGAGTTGTTCATAGAATATCTTATACGCAATTGTGCTTTAACAGAACAAAATCAGAGTGATCTTGATAGCATACCAAATAAGAGAATCGAGATGAAAATTGGAGCGGTTACCCCTGGTGAATTACGAGCAGTTTGTGAAAAAGGTCTCCTGTTGGTCACTATTACAATTCCTGAAATGGAGCATATCCTATGGCCTTTTCTGTTGAAGATGATTATACCACAGACCTACACTGGTGCTGTTGCTATGGTTTGCAGGTGCATCTCAGAACTGTGGCGGCATAGATCTTATGGTAGTGATATGTTAAGTGAGTGCAAAAGCCGTCCTGATATTCCAACTGCCGAAGAACTTCTTGCCCGTTTTGTGGTGCTTTTACACGATCCTCTAGCAAGGGAGCAATTGGCCACCCAGATTTTGACAGTTCTATGTCTCCTGGCACCTCTATTTCCAAAAAATATCAATTTGCTTTGGCAAGATGAGATTCCAAAGATGAAGGCATATGTTAGTGATACAGATGACTTGAAACAAGATCCATCATATCAAGACACTTGGGATGACATGATAATCAACTTTCTTGCAGAATCTTTGGATGTGATCCAAGATGCAGATTGGATTATGTCTCTTGGAAATGTATTTGCCAAACATTATGAACTTTATACATCTGATGATGAACATGCTGCAATTCTTCACCGATGCTTGGGGATTCTGCTTCAAAAGGTTAATGACAGAGCTTATGTCCATGATAAAATGAATTGGATGTATAAGCAATCTAACATTGCAATCCCAACAAATAGGCTTGGTTTGGCAAAAGCAATGGGATTGGTTGCTGCATCTCACTTGGACACAGTGTTGGAGAAGCTGAAGGATATCATAGACAATGTTGGACAAACCATAATTCAGAGGTTACTGTCATTGTTCTCTGATAGTTACAGAACAGTAGAGTCTGATGACATACATGCTGCCTTGGCTTTAATGTATGGATATGCTGCGAAGTATGCCCCATCATCGGTTATTGAAGCCAGAATAAATGCCCTTGTTGGCACCAACATGCTTTCAAGGCTTCTTCATGTGCGTCACCCTATAGCAAAGCAAGCTGTGATCACAGCAATTGATTTACTTGGTAATGCTGTCATTAATGCTGCTGAAAGTGGTGCACCATTTCCATTGAAAAGAAGGGACCAACTGCTAGATTATATTTTAACTTTAATGGGTCGAGATGATAATGATGGTTTTGCTGATTACAATGAACTCTTACGTACTCAGGCTCTTGCGATAAGTGCCTGCACTACATTGGTCTCTGTGGAGCCAAAGCTCACGGTTGAAACGAGAAACTATGTGATGAAGGCCACATTAGGGTTCTTTGCGATACAAAATGATCCAGTTGAAGTCGTCAGTCCCCTTATAGACAACCTGATATCTCTTTTATGTGCAATTCTTCTCACTGGTGGAGAGGATGGAAGAAGTCGAGCAGAGCTGCTAATGCTTATCCTGAGGCAAATTGATCAATTTATATCTTCCCCTGTTGAATATCAGAGGAAAAGAGGTTGTCTTGCAGTCCATGAGCTGCTTCTCAAGTTTCGGATGGTTTGTGTTAGTGGCTATTGCGCACTGGGATGCCATGGGAATTGTGTACATACCAAGCAAATTGACCGTTCTCTATATGGGAATTTTTCTAAGCTACCATGTGCATTTGTATTGCCAAGTCGTGAAGCTTTGTGCTTGGGAGATAGAGTAACTATGTATCTTCCACGTTGTGCAGACACAAATTCTGAAGTCCGAAAAATATCAGCGCAAATTCTTGATCAGCTCTTCAGCATTTCTCTCTCTCTTCCTAAACCTCCTGGTTTGTCTATATCTGCTGAAGATATAGAATTTTCATACAGCGCTTTGTCTTCTCTTGAAGATGTTATAGCCATGCTGAGGAATGATACCTCTATTGATCCATCAGAAGTTTTCAACAGGATCATTTCCTCCCTCTGTATTCTGTTGACAAAGGATGAGCTGGTTGCTATGCTTCATGGTTGCTCAGTAGCTATATGTGATAAGATCAAGCAGTCAGCTGAAGGCGCTATTCAAGCTGTTGTTGAGTTTGTCACCAGAAGAGGGGGTGAACTGACTGATATTGATATCTCAAGGACAACACAGTCATTGATCTCTGCCACTGTGCATGCAATTGACAAGCATTTGCGTGTGGAAACCCTTGGTGCTATTGCTTCTTTGGCTGAAACTACTAGTGCAAAAACTGTTTTTGATGAAGTCCTGGCTACTGCTGGAAAGGATGTAGTAACGAAGGATATATCTAGGCTGCGTGGTGGATGGCCCATGCAGGATGCATTCTATGCATTTTCGCAGCACATGGTTCTTTCAGGGTTATTTCTAGAACATGTGATATCTGTCCTTAGTCAGATTCCTGTCCTTAAATGTGATGTAGACAGAGTTGATGATAGCCAAGTCCACAATCATACAGAGGATGGAAAACTGGAAGCTGCAATTTTTGCTCTTACCGCTTTTTTCAGATGTGGGGGAAAAGTTGGAAAAAGGGCTGTTGAGCAAAACTATGCTTCTGTTCTTTCTGAGCTGATGCTGCAACTTGGAAGCTGTCATGGGTTAGCTTACTCTGGCCACCTTGAACCATTGCGGAATCTTCTGACTGCATTCCAGGCATTCTGTGAATGTGTTGGTGACCTTGAGATGGGAAAGATTTTAGCTAGAGATGGGGAACTTTCAGAAAAAGAGAGGTGGATTAATCTCATTGGAGACATAGCCGGTTGCATATCTATAAAGAGGCCAAAAGAGATCCAAAATATTTGCCAAGTTTTGATAAGATCGTTGGATCGACCCCAGAAATACCAAAGGGAAGCTGCTGCTGCTGCTTTGTCAGAATTTGTTCGTTATAGTGGTGGACTTGGTTCGCTTTTGGAGCAAATGGTTGAGGTTTTATGTAGACGTGTATCAGATGAGTCTTCTACTGTTCGGCGCTTTTGTTTGAGAGGATTAGTACAGATCCCGTCAATTCATATTCTGAAGTATACAACTCAAGTCCTGGGTGTTATATTAGCTCTGCTAGACGATTCTGATGAATCTGTACAGTTAACTGCAGTGTCATGCTTACTGATGATTCTCGAATCTTCACCTGATGATGCAGTTGAGCCGATTTTGCTTAATCTTTCAATACGGCTTCGAAATTTACAAACAAGCATGAATGCAAAGATGCGAGCCAGTTCCTTTGCAGTATTTGGAGCACTAAGCAACTATGGAATTGGGGCACTAAGAGAGGCATTTGTTGAGCAGGTGCATGCTGCTATTCCTCGTCTAGTTTTACATCTTCATGATGAAGATACTAGTGTCCGACTAGCCTGCCGGAATACCCTGAGACAAGTTTTTCCATTGATGGAAATCGAAGGATTGCTTGCCCTACTAAACACATCGAGTTTCCTTTCTGATCACCGAAGTGACTATGAGGACTTTCTACGAGATATTGCAAAGCAATTTACACAGCATCTACTTTCCAGAGTGGATACTTATATGGCGTCAACAGTGCAGGCTTTTGATGCACCATGGCCCATAATTCAGGCAAATGCTATGTACTTATGTAGCAGCATGCTCTCTCTATCTGACAATCAGCATATTTTAGCTGACTACCATACACAGGTATTTGGTGTGCTGGTTGGCCAAATGAGTCGATCACCTGATGCTGTTGTAAGGGCAACATGCTCTGCTGCTTTGGGCTTGTTGCTCAAATCTTCCAACTCATGTTCATGGAGAGCAGTTCATCTTGATCGGCTAGAATCCACAATAAGGAACCATGATACGGCGGAGTCTATGATAACCTAG 5136 0.4198 MASSISIPAPEAINVLLSLLNDDSSSVRESSMSSLKDLAALNPVLVLECCATVSRGGRRRFGNMAGVFQVMAFGVRALDERDVDSAFMAKLAKIATSEMISSKELNSDWQRAATSLLVAIGSHLPDLVMEEIFLHLSGTSSALQAMVQILAEFASSSPLLFIPRWKGVLSRILPILGNVRDMHRPTFANAFKCWCQAAWQYSTDFPSHLPQDGDVMSFLNSAFELLLRVWAASRDLKVRVASVEALGQMVGLITRTQLKAALPRLVPTILDLYKKDLDIAFLATCSLHNLLNASLLSESGPPMLDFEDLTLTLATLLPVVSMNSENKDQTDFSVGLKMYNEVQHCFLTVGLVYPDDLFLFLVTKCRLKEEAATFGALCVLKHLLPRLSEAWHSKIPLLVEAVKSLLEEHNLGVRKALSELIVVMASHCYLVGSSGELFIEYLIRNCALTEQNQSDLDSIPNKRIEMKIGAVTPGELRAVCEKGLLLVTITIPEMEHILWPFLLKMIIPQTYTGAVAMVCRCISELWRHRSYGSDMLSECKSRPDIPTAEELLARFVVLLHDPLAREQLATQILTVLCLLAPLFPKNINLLWQDEIPKMKAYVSDTDDLKQDPSYQDTWDDMIINFLAESLDVIQDADWIMSLGNVFAKHYELYTSDDEHAAILHRCLGILLQKVNDRAYVHDKMNWMYKQSNIAIPTNRLGLAKAMGLVAASHLDTVLEKLKDIIDNVGQTIIQRLLSLFSDSYRTVESDDIHAALALMYGYAAKYAPSSVIEARINALVGTNMLSRLLHVRHPIAKQAVITAIDLLGNAVINAAESGAPFPLKRRDQLLDYILTLMGRDDNDGFADYNELLRTQALAISACTTLVSVEPKLTVETRNYVMKATLGFFAIQNDPVEVVSPLIDNLISLLCAILLTGGEDGRSRAELLMLILRQIDQFISSPVEYQRKRGCLAVHELLLKFRMVCVSGYCALGCHGNCVHTKQIDRSLYGNFSKLPCAFVLPSREALCLGDRVTMYLPRCADTNSEVRKISAQILDQLFSISLSLPKPPGLSISAEDIEFSYSALSSLEDVIAMLRNDTSIDPSEVFNRIISSLCILLTKDELVAMLHGCSVAICDKIKQSAEGAIQAVVEFVTRRGGELTDIDISRTTQSLISATVHAIDKHLRVETLGAIASLAETTSAKTVFDEVLATAGKDVVTKDISRLRGGWPMQDAFYAFSQHMVLSGLFLEHVISVLSQIPVLKCDVDRVDDSQVHNHTEDGKLEAAIFALTAFFRCGGKVGKRAVEQNYASVLSELMLQLGSCHGLAYSGHLEPLRNLLTAFQAFCECVGDLEMGKILARDGELSEKERWINLIGDIAGCISIKRPKEIQNICQVLIRSLDRPQKYQREAAAAALSEFVRYSGGLGSLLEQMVEVLCRRVSDESSTVRRFCLRGLVQIPSIHILKYTTQVLGVILALLDDSDESVQLTAVSCLLMILESSPDDAVEPILLNLSIRLRNLQTSMNAKMRASSFAVFGALSNYGIGALREAFVEQVHAAIPRLVLHLHDEDTSVRLACRNTLRQVFPLMEIEGLLALLNTSSFLSDHRSDYEDFLRDIAKQFTQHLLSRVDTYMASTVQAFDAPWPIIQANAMYLCSSMLSLSDNQHILADYHTQVFGVLVGQMSRSPDAVVRATCSAALGLLLKSSNSCSWRAVHLDRLESTIRNHDTAESMIT 1711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04346 1711 SUPERFAMILY ARM repeat 10 807 IPR016024 -
Trre13g04346 1711 Gene3D - 1339 1440 IPR011989 -
Trre13g04346 1711 Gene3D - 1441 1684 IPR011989 -
Trre13g04346 1711 SUPERFAMILY ARM repeat 937 1436 IPR016024 -
Trre13g04346 1711 Pfam non-SMC mitotic condensation complex subunit 1 1405 1519 IPR032682 -
Trre13g04346 1711 SUPERFAMILY ARM repeat 10 1687 IPR016024 -
Trre13g04346 1711 Gene3D - 3 449 IPR011989 -
Trre13g04346 1711 PANTHER MAESTRO-RELATED HEAT DOMAIN-CONTAINING 52 1689 IPR045206 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04346 Trre-Chr13 51101730 51138473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04346 K24816 - gmx:100800961 2964.48