Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04345 ATGGCTAAAAAAAATACGAAGAAGAAAACTCCACCGATTATTGATCGTGTTCCCAAACATTCTCAACAGCCAAGAAGTTCACCTCCTAAACGCCGCACTGATTTCTCTTTTTTCAATCGTGTTCCTTCTTCTTTTCCCAATCCTCCTATTATTGATTCCTCGCCCGGTTCATCTTCCGGTGAAGTGAGGTTTTCGAATGTCACTGCAAACAGTTCACTGGAGAGGAGAATGGCAATTAAACAATTTTCTAAAGATACGCTGGTTCGATGTAACAAGTTCCAAGAGGGTAGACCAGTCTGTTCATCCGAGTCTTTTGATGTTCCAGTTGCAGAATTGGATTCAGTTGACCTTTGCGGCAATAGGGATTTTAAGATGTCAGAATCTACACCTCGCGAATCATCTGTCAGTGATAACAGTTCTCTTGCTGTAACCCCTGGAAATGTTGTATGGGCAAGAACATCTTGTCAAATGTGGTGGCCTGCTGAGATCATAGAAGAGAGATGTGCATTATCTGACTGCGTTAGTGATGGACTTGTTTTAGTGCAGTTTTATGGAAATCATCCCAGTGCTTGGATTGATCCAGCAACAGATATTTCAATTTTTGAGGATTCTTTTGAAGAAAGGAGCAATAACCCTTCAAATGATTTTCAAGAAGCTCTACAGCAAGCCTTGCAAAGAAAGGCACAACTCAGTTCTTGCCAAAATTTGAGTCCTGATAGGTCTGCTCATTCTAATCGGCAAGAACGTTCAGCTGGTAAGTACACTTCGCCCAGCTCAAGCGGAACAAAAAATGATTCTCAAGAGAGACGGAGAGGGAAAAGGGAACGTAAGCCCAAAGTTCATTTTGACGAGGAAACTTATCCAATGAAAACGGAAAGGAAGGATCGTCGGTTAAAGATAATGCGGTACCTTGGCCTTGCACCTCCAGTTGGTTCTCCTTTTTGA 945 0.4222 MAKKNTKKKTPPIIDRVPKHSQQPRSSPPKRRTDFSFFNRVPSSFPNPPIIDSSPGSSSGEVRFSNVTANSSLERRMAIKQFSKDTLVRCNKFQEGRPVCSSESFDVPVAELDSVDLCGNRDFKMSESTPRESSVSDNSSLAVTPGNVVWARTSCQMWWPAEIIEERCALSDCVSDGLVLVQFYGNHPSAWIDPATDISIFEDSFEERSNNPSNDFQEALQQALQRKAQLSSCQNLSPDRSAHSNRQERSAGKYTSPSSSGTKNDSQERRRGKRERKPKVHFDEETYPMKTERKDRRLKIMRYLGLAPPVGSPF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04345 314 SUPERFAMILY Tudor/PWWP/MBT 143 235 - -
Trre13g04345 314 MobiDBLite consensus disorder prediction 264 296 - -
Trre13g04345 314 MobiDBLite consensus disorder prediction 248 263 - -
Trre13g04345 314 MobiDBLite consensus disorder prediction 1 63 - -
Trre13g04345 314 Gene3D - 133 236 - -
Trre13g04345 314 MobiDBLite consensus disorder prediction 20 63 - -
Trre13g04345 314 PANTHER PWWP DOMAIN-CONTAINING PROTEIN 32 302 - -
Trre13g04345 314 Pfam PWWP domain 146 225 IPR000313 -
Trre13g04345 314 MobiDBLite consensus disorder prediction 227 296 - -
Trre13g04345 314 CDD PWWP 146 224 - -
Trre13g04345 314 MobiDBLite consensus disorder prediction 227 241 - -
Trre13g04345 314 ProSiteProfiles PWWP domain profile. 145 203 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04345 Trre-Chr13 51093928 51098538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04345 - - gmx:100801494 413.305