Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04312 ATGGATATCGATGAAGCGATTAGAGGGTGTGAGGATCGAAGACTTCAGACCAAGTACAACAATGCTACTTATGTTATTCAGAGAGCTTTGTCTTTGTATTCTATTGAGGAGGTTGCCTTCAGTTTCAATGGTGGAAAGGATTCAACGGTTTTGTTGCACCTACTCAGGGCTGGCTATTTCTTGCATAAAATGGGGCAAAGCAGTGCCAATGGAGATGTAAAAGATTTTCCAATACGAACAATATACTTTGAAAGTCCTAGTGCTTTCCCGGAAATCAACTCATTTACCTATGATATCGCTGACACCTATGGTTTGCAAATTGACACCATCCGGTTAGATTTCAAGTCTGGTTTGGAGACTTTGCTGAAAGATAAACCAATTCGAGCTATTTTCCTTGGAGTTCGAATCGGAGATCCTACTGCGGTTGGCCAAGAACAATTTTCCCCCAGTTCACCTGGCTGGCCACCTTTCATGAGAGTCAATCCCATTTTAGATTGGTCATACAGAGATGTCTGGGCCTTCCTTTTGACTTGCAAGGTGAACTATTGCAGCCTTTATGATCAAGGTTATACTTCAATTGGAAGCATATATGACACAGTTCCCAACTCCTTACTATCCATTAGCAATTCTTCCAATAAATTCAAACCAGCATATTTACTTGCTGATGGAAGATTAGAGAGGGCAGGGAGGGTTAAAAGGACATCTTCTGCTGGTGGTCAACTTCTTGCTGATAGCAATGGCTTGGATTTGCATAAAAACAGCACACTCACAGCATCAATTATTGCCGTGGGAGATGAGATTCTGTTTGGCATTGTTGAGGATGAGTTGGGACCATATTTATGCAGGAAGCTGGGTTCTGTTGGCTGGTCTGTGTTGCAATATTCTGTAGTACACAATAATATAGATTCTGTGGCAGAAGAAGTTGAGCGACAGAAGTCTAGGACCGACATGGTATTTATATATGGAGGTGTAGGTCCACTTCATTCAGATGTTACCTTAGCAGGAATTGCAAAAGCTTTTGATGTCCGTTTGGCTCCTGATGAAGAATTTGAAGAATATCTACGGCATATTATTAGTGATCAGTGTATTGGTGATAGGAATGAGATGGCTCAATTGCCCGAGGGCATAACTGAATTACTGCATCATGACAATTTGACTGTACCCTTGATGAAGGAAGTAGAGATCACGTAA 1191 0.4148 MDIDEAIRGCEDRRLQTKYNNATYVIQRALSLYSIEEVAFSFNGGKDSTVLLHLLRAGYFLHKMGQSSANGDVKDFPIRTIYFESPSAFPEINSFTYDIADTYGLQIDTIRLDFKSGLETLLKDKPIRAIFLGVRIGDPTAVGQEQFSPSSPGWPPFMRVNPILDWSYRDVWAFLLTCKVNYCSLYDQGYTSIGSIYDTVPNSLLSISNSSNKFKPAYLLADGRLERAGRVKRTSSAGGQLLADSNGLDLHKNSTLTASIIAVGDEILFGIVEDELGPYLCRKLGSVGWSVLQYSVVHNNIDSVAEEVERQKSRTDMVFIYGGVGPLHSDVTLAGIAKAFDVRLAPDEEFEEYLRHIISDQCIGDRNEMAQLPEGITELLHHDNLTVPLMKEVEIT 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04312 396 Gene3D - 254 394 IPR036425 -
Trre13g04312 396 Pfam Phosphoadenosine phosphosulfate reductase family 38 200 IPR002500 GO:0003824
Trre13g04312 396 CDD PAPS_reductase 37 194 IPR002500 GO:0003824
Trre13g04312 396 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 272 352 - -
Trre13g04312 396 FunFam Phosphoadenosine phosphosulfate reductase family protein 254 395 - -
Trre13g04312 396 Gene3D HUPs 4 234 IPR014729 -
Trre13g04312 396 SMART MoCF_biosynth_3a 259 393 IPR001453 -
Trre13g04312 396 FunFam Phosphoadenosine phosphosulfate reductase family protein 4 234 - -
Trre13g04312 396 Pfam Probable molybdopterin binding domain 260 351 IPR001453 -
Trre13g04312 396 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 189 - -
Trre13g04312 396 SUPERFAMILY Molybdenum cofactor biosynthesis proteins 256 357 IPR036425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04312 Trre-Chr13 50794777 50801319 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04312 - - gmx:100816619 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04312 13 50794777 50801319 Trre13g04312 13 50794777 50801319 ECH