Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04310 ATGGATATGAGTAGCAACGGAGAAGAAGAAGATAACTCAAAGAAAGGATTGGAAGGAACTGGTTTAGCTTTACCCATTAATCGTCACTCCAATTTGAAAAGCGCTTCTTCTGATAACGACTTCACCCAAATCCTCACACACATCAAATCCTCCAAAACTCCCGCTGTTATTAATTATGGTGCCTCATGGTGTGGCGTTTGCAGCCAAATTCTACCTGTATTCTGTAGACTGAGCAACAAATTCCCAAAGCTTAACTTTATATATGCAGATATTGATGAATGCCCGGAAACAACTCAACACATTCGATACACTCCGACCTTCCAGTTTTTCCGAGATGGTGAAAAGGTAGATGAGATGTATGGTACTGGAGAAGAGAGGCTGCATGATCGTCTATGGTTGCACTCGTGA 408 0.4191 MDMSSNGEEEDNSKKGLEGTGLALPINRHSNLKSASSDNDFTQILTHIKSSKTPAVINYGASWCGVCSQILPVFCRLSNKFPKLNFIYADIDECPETTQHIRYTPTFQFFRDGEKVDEMYGTGEERLHDRLWLHS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04310 135 PANTHER THIOREDOXIN-LIKE 3-3 4 135 IPR044193 -
Trre13g04310 135 MobiDBLite consensus disorder prediction 1 20 - -
Trre13g04310 135 Pfam Thioredoxin 39 127 IPR013766 -
Trre13g04310 135 Gene3D Glutaredoxin 10 133 - -
Trre13g04310 135 CDD TRX_family 43 121 - -
Trre13g04310 135 SUPERFAMILY Thioredoxin-like 28 128 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04310 Trre-Chr13 50735193 50736159 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04310 K03671 - rcu:8283997 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04310 13 50735193 50736159 Trre13g04310 13 50735193 50736159 ECH