Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04280 ATGGCGTCCAGCGACTTCTCTTCAGCTCCCTCTCTCGAGAAGCAATTTGGCGAATTCAGAACCCACCTCGAAGAATCTGGAACCTTGCGCGATCGAATTCGAACTGTTGTTTCCGAAATTGAGTCCACCACAAGGATAATGTATGCTAGCATTCTCCTTGTTCATCACTCTCGTCCTACTCCAGAACTTTTGGAGAAGGCAAAATCTCAGATTGATGTGCTAAAGGAGAAGTATAATCAACTTGCTGATATTCTTGGAGGATGTCCTGGTCAATACTATAGGTATCACGGTGATTGGAGGAGTGAGACACAGTCTGTTGTTTCTGTGCTTACTTTTATGCACTGGCTTGAAACGGGAAAACTACTCGAACACAAAGAAGCTGAGGAAAAACTTGGGTTGAATGGCCCGGAGTTCAATCTAGATGTTGAAGACTACCTAGTTGGTGTTTGTTTTATGTCTAATGAATTGCCAAGATATGTGGTTAATCAAGTAACAGCTGGGGACTATGATTGTCCAAGGAAGGTCTTAAAGTTTTTAACAGAACTTCATGCTGCATTCCGAATGCTCAATCTACGAAATGATTTTCTGCGGAAGAAGTTTGATGGCATGAAGTATGACCTTAGAAAAGTAGAAGAAGTTTACTATGATGTTAAGATTAGGGGTTTGACACCAAATGGTGAGTCAGTTGCAGATCAAGGAACCGAAAGGCAATCCTAG 717 0.4198 MASSDFSSAPSLEKQFGEFRTHLEESGTLRDRIRTVVSEIESTTRIMYASILLVHHSRPTPELLEKAKSQIDVLKEKYNQLADILGGCPGQYYRYHGDWRSETQSVVSVLTFMHWLETGKLLEHKEAEEKLGLNGPEFNLDVEDYLVGVCFMSNELPRYVVNQVTAGDYDCPRKVLKFLTELHAAFRMLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLTPNGESVADQGTERQS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04280 238 Gene3D Translin; domain 1 1 136 IPR016068 GO:0043565
Trre13g04280 238 SUPERFAMILY Translin 12 222 IPR036081 GO:0043565
Trre13g04280 238 FunFam Putative translin 138 230 - -
Trre13g04280 238 Pfam Translin family 30 221 IPR002848 GO:0043565
Trre13g04280 238 Gene3D Translin; domain 2 138 236 IPR016069 GO:0043565
Trre13g04280 238 FunFam Translin 8 138 - -
Trre13g04280 238 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 9 226 IPR002848 GO:0043565
Trre13g04280 238 Coils Coil 64 84 - -
Trre13g04280 238 CDD Translin 19 221 IPR033956 GO:0003697|GO:0003723|GO:0016070
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04280 Trre-Chr13 50457917 50461559 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04280 - - ccaj:109796855 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04280 13 50457917 50461559 Trre13g04280 13 50457917 50461559 ECH