Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04278 ATGAGCGACCAATCACGGTTGCAGAACGTGCGTTCTACTGCACAACTTCTGAGAGAAGCAACCTCATCATTCTCCGCAAATCTCTTCACATTTCTATTCCTATCTCTCTTAATCTTCTCTTTTCGAACAATCGTCGAAAACGGTACCTCACGTTTCATCACGTTTGTTGACCGTGATCCCGCCGTTAAATCTCTTCTTTCTCGTCTTGACCTTGCCGGTAACGTTAATCATCAACACCGTCAACGTTCTCCTCAGTATCATCCTTCTCCCGCCGCCTTACGTCGTCGTCGTCCTTTTTTGCATCTAACTCGTGTCGGAACCCTAGATGATGATTTTTTCTCCGGTGATGATGATGACGGTAGGACTCTTTTCGGATCAAATTCCAAAGCTCCGGTTAACGGTAGTATCGTTGCTTTTGGACCTTTTGCGATTGATTCTGGATTTTCGGATCTTGTTGCTGATAATGGAGTTAGGGTTTTTGAAATTGTTCGTTCTGGAATCACGTTGAAAGCTGATGATTCTTCAATTGAGGTTGAAAAAGACGAGGTTGATGATGTTGATGACGAGAAAGATGAGAAAGACGAGAAAGAGGAACAAGAACATGGACATGAACAGAAGAAGGAGAAGAGGGATTTGGGGAATGGGAAAGAAGAGACTGTGACAAGTGTTGATTTGAAATTATTTGTGAATGGATTGGAGATAAGTCGGCGTGATACGGCGGCGTTTTTTGTTCTTTTAGGTTCATTGTCAGTGGCTTATGGATGGGTGATTATGGTTTTTCTTGTTACTTATTCGTGTGTATTAGGCGTTGTTGTTGTTTCGGTTGTTAATGATCTTGTAGGAAGGTTTAGTTCTGTTACTGGTGTGGTTTGGGATGGTTTCAGATTAGGTTTGAAGAGGATTTCTGCTGTTGTTTTGATAAGATGGGCTGTGAGAGATGCAGTGACTCAGCTTGTTGGAATATGGTATTTTGCTGAAATTGAGGATCAGTTTTCGTTTTTCAAGCTATTTGTTAGGTTGAAATTGATGCCTTTTTCGGTTATGTCGCCTTGGGTTAGGGGTTTTGAGAAGGAGATATCTGGGTTTTTGTTCACTTGGTTTCTAATGGATACATTTGTGACTTTTATATTCTCTGTTGATTTTTGGGTTGCTTTGGAGGATTTCAGGAGGGGTAGTAAGGAGATTGTGAAGGAAGGTTGTTATTTGTTGTCTTCCATGTTGCATCAAGCTATTCAGATTAAATGTTTGGAAGCTGTGCTCTGTGGGTCGTTTATGAGGTGGGTTTTGGCTCGAATTTGCGGGAGAGTTGTTGCCAAGATGTTTCAGTCTACCATGGAGGTTTACTTCATGGTTACTTGGCTTGTGTTTTACTTTGTGGCTAAGAGTAGGGATGCTAATCAACAGGGCCGCTGCAATGTTTCACAGTGGCATGAATTGAACATCATCAACAAGGAAAAGCACATGAATCTGCAAAAGCTGGCTAATTTGCTGTGA 1494 0.417 MSDQSRLQNVRSTAQLLREATSSFSANLFTFLFLSLLIFSFRTIVENGTSRFITFVDRDPAVKSLLSRLDLAGNVNHQHRQRSPQYHPSPAALRRRRPFLHLTRVGTLDDDFFSGDDDDGRTLFGSNSKAPVNGSIVAFGPFAIDSGFSDLVADNGVRVFEIVRSGITLKADDSSIEVEKDEVDDVDDEKDEKDEKEEQEHGHEQKKEKRDLGNGKEETVTSVDLKLFVNGLEISRRDTAAFFVLLGSLSVAYGWVIMVFLVTYSCVLGVVVVSVVNDLVGRFSSVTGVVWDGFRLGLKRISAVVLIRWAVRDAVTQLVGIWYFAEIEDQFSFFKLFVRLKLMPFSVMSPWVRGFEKEISGFLFTWFLMDTFVTFIFSVDFWVALEDFRRGSKEIVKEGCYLLSSMLHQAIQIKCLEAVLCGSFMRWVLARICGRVVAKMFQSTMEVYFMVTWLVFYFVAKSRDANQQGRCNVSQWHELNIINKEKHMNLQKLANLL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04278 497 MobiDBLite consensus disorder prediction 195 215 - -
Trre13g04278 497 Coils Coil 176 206 - -
Trre13g04278 497 PANTHER TRANSMEMBRANE PROTEIN 2 470 - -
Trre13g04278 497 MobiDBLite consensus disorder prediction 178 215 - -
Trre13g04278 497 MobiDBLite consensus disorder prediction 178 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04278 Trre-Chr13 50439374 50441338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04278 - - mtr:11435258 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04278 13 50439374 50441338 Trre13g04278 13 50439374 50441338 ECH