Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04271 ATGGACACACGCAGTGTTGTTGAGATTAAACATTCAAAGTTCAAAAGAATTTGTGTTTTTTGTGGTAGTAGTCCTGGCAAAAAAACTACTTACCAAGATGCTGCCATTCAACTTGGCAATGAATTGGTTTCAAGGAACATTGATCTTGTGTATGGAGGTGGAAGCATTGGTCTAATGGGTTTAGTTTCACAAGCTGTTCATGATGGTGGTCGCCATGTCATTGGTGTTATTCCCAAGACACTCATGCCTCGAGAGCTAACTGGTGAAACAGTAGGAGAAGTTAAGGCTGTTGCTGATATGCATCAAAGAAAAGCTGAAATGGCTAAGCATTCAGATGCTTTCATTGCTTTACCAGGTGGATATGGTACTCTCGAGGAGCTTCTTGAAGTCATAACATGGGCTCAACTTGGAATTCATGACAAGCCGGTTGGATTAGTAAACGTTGATGGATACTTTAACTCGTTGTTGTCATTCATTGACAAAGCTGTGGAAGAAGGATTTATTAGTCAAAATGCTCGTCACATTATTGTATCAGCACCAACTGCAAAAGAGTTAGTTAAGAATTTGGAGGATTATGTTCCATGTCATGAGGGTGTTGCTTCAAAGTTGAGCTGGCAGATGGAACAGCAGCTAGCATACCCTCAAGATTATGACATCTCAAGGTAG 666 0.4069 MDTRSVVEIKHSKFKRICVFCGSSPGKKTTYQDAAIQLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISQNARHIIVSAPTAKELVKNLEDYVPCHEGVASKLSWQMEQQLAYPQDYDISR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04271 221 SUPERFAMILY MCP/YpsA-like 13 192 - -
Trre13g04271 221 PANTHER LOG FAMILY PROTEIN YJL055W 9 217 - -
Trre13g04271 221 FunFam CASP-like protein 5 191 - -
Trre13g04271 221 NCBIfam Rossman fold protein, TIGR00730 family 15 192 IPR005269 GO:0009691|GO:0016787
Trre13g04271 221 Gene3D - 5 191 - -
Trre13g04271 221 Pfam Possible lysine decarboxylase 59 188 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04271 Trre-Chr13 50274433 50278181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04271 K22522 - gmx:100787375 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04271 13 50274433 50278181 Trre13g04271 13 50274433 50278181 ECH