Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04269 ATGGCTTCTTCTAGGAAGAAGAGTTTCCTTTCAAGAACAAGTTACATTTTTCCAACATCATCAGAGTCAACAGAGACAAATTTCACTACAAAATCATCTGAAAAAACTGAATTGGAGTTTGATGAAGCTGAAATATGGAACATGTCATATTCAAATTCCAACACAACAACAACAGAACCAAAAAAGAGTATACCAGGTTTGAAGAGAGTTTCTAGAAAAATGGAAACTAATAACAAAGTTAATCCAATAGCTTCATCTTCATTACCAATGAATATACCAGATTGGTCAAAGAAAAACAAAGAGAATAGTGATGATGATGGTGATTATGATGAAGTGATTCATCTACATCCTCATGAATATCTTGCTAGAACAAGAGGAGCTTCTCTTTCTGTTCATGAAGGGAAAGGAAGAACTTTGAAAGGTAGAGATTTGCGTAGTGTTAGGAATGCTATTTGGAAGAAAGTTGGATTTGAAGATTGA 480 0.3375 MASSRKKSFLSRTSYIFPTSSESTETNFTTKSSEKTELEFDEAEIWNMSYSNSNTTTTEPKKSIPGLKRVSRKMETNNKVNPIASSSLPMNIPDWSKKNKENSDDDGDYDEVIHLHPHEYLARTRGASLSVHEGKGRTLKGRDLRSVRNAIWKKVGFED 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04269 159 MobiDBLite consensus disorder prediction 49 110 - -
Trre13g04269 159 MobiDBLite consensus disorder prediction 76 93 - -
Trre13g04269 159 PANTHER EMB|CAB72159.1 1 159 - -
Trre13g04269 159 Pfam Senescence regulator 37 159 IPR007608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04269 Trre-Chr13 50239878 50240357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04269 - - vra:106757485 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04269 13 50239878 50240357 Trre13g04269 13 50239878 50240357 ECH