Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04262 ATGGACACAAAGATCCTCAATTTCCAGATCCATAATGGGTCAATCATACAGCGCGTATTCTTTCGATCAATTCTACTTGCAGCTACCATTTCCATGGTTGCTCTTCTTCGTCTTCGCGCTTTATCGGATTTCAATTTTGGAAATTTAGTTCCAATTGCAAACAATTTCAATTGTTTTGCAGATTCAGAAAACGTCACTTTAAACCAACCCAGTTCAAATTTCTTTCAGAATCGCTTCTGGGGTGTAATGAATTGTGAAAAAGACGTTAACTTGACAGTGAATGTTGTCACTGAATTAATGGGTATGCAGTTTTTGAACTGTGATGCTAATACCCTTTGTGTGGGTGAAGATTCTTCAATGGCTGTTAAAGCAATGAAACAGTTGGGTTTTTCAACTGTTAGTGGTGTTTACACCAACCGTTTTTTCTCCCTCAAGATGAAGAAGTTCATTTATGAATTAGATTATCAAGATTCTTCATTTGACTTTGTTTTGTCTAAGGATCTTGATAAGGTTTCTGTACCTGCTTTGCTTGTACTTGAGGTTGAACGTGTTCTTAAACCTAATGGAATTGGTGCACTTCTTGTTGCTGCTAAAAGTTCACATCATCACAATGATTTGATTAGATCAGCTACACCAGTTTCATCATTGTTGAGATCTTCTAGTGTTGTTCATGTTGATTCTATTGATGATGAACTTAATCTTGTTGTTTTCAAGAAAAGATCTCAAAATGCAACAACTTTTTTCAATCATAATCAGATTACTTTACCTGCTGATTGTCCTAGCTTGACATTAACCAAGCCTCTCATAGATCTTATGGAGCCTCTTGTGAGCGAAAAACCGATGCGCGTGTCCCCGGTTTCTTATTTGCCTAAGTTTGTTGATGTTTCTACTAGGAAGAGGTTGGTTTATATTGATATTGGTGTAGGAGAGCTTTTGAATGCAAATGTTAGTGATTGGTTCCTACCATCATATCCAATTGATCAGAAAGATTTCAATGTGTATTTCGTTCACTACAACACTTCGATAATGTTGTCTTATGTGAAGCGACCAGGTATCACGTTTGTTTATCATCCTGGATTAGCCGGTAAAGTCACTACCGAAGTTGATGATATTGGAGACGAAAATGATGATCTAGATCATTATGGTGGGGAAGAAGAGTTTGATTTCCTTGCTTGGTTCAAAGAAACTGTGCAATATGCTGATTTTGTTGTCTTGAAGATGAATGCCGGTGAAGTTGAACTCAAGTTCTTATCTGATGTATTTGATAGTGGAGCTATATGCTTTGTTGATGAATTGTTTCTAAGATGTCCTGAGAAAAGTGATGATGATAAAACTAATGTTGGGACAAGCAAGGAAGATTGCATGGATGTTTACAAAAGTCTCAGAAACAGTGGTGTCTATGTGCATCAATTGTGGGGAGATGAAATTGCTTACAAGACCAAACCTTAG 1449 0.3692 MDTKILNFQIHNGSIIQRVFFRSILLAATISMVALLRLRALSDFNFGNLVPIANNFNCFADSENVTLNQPSSNFFQNRFWGVMNCEKDVNLTVNVVTELMGMQFLNCDANTLCVGEDSSMAVKAMKQLGFSTVSGVYTNRFFSLKMKKFIYELDYQDSSFDFVLSKDLDKVSVPALLVLEVERVLKPNGIGALLVAAKSSHHHNDLIRSATPVSSLLRSSSVVHVDSIDDELNLVVFKKRSQNATTFFNHNQITLPADCPSLTLTKPLIDLMEPLVSEKPMRVSPVSYLPKFVDVSTRKRLVYIDIGVGELLNANVSDWFLPSYPIDQKDFNVYFVHYNTSIMLSYVKRPGITFVYHPGLAGKVTTEVDDIGDENDDLDHYGGEEEFDFLAWFKETVQYADFVVLKMNAGEVELKFLSDVFDSGAICFVDELFLRCPEKSDDDKTNVGTSKEDCMDVYKSLRNSGVYVHQLWGDEIAYKTKP 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04262 482 PANTHER PEPTIDE UPSTREAM PROTEIN 1 474 - -
Trre13g04262 482 Pfam Methyltransferase domain 150 190 IPR013216 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04262 Trre-Chr13 50174792 50176240 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04262 - - gmx:100783651 583.178