Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04227 ATGCATTATTCTGGCCTGTATGTCATTGGAAATTCCTGCTGTGGTTATAATGCTCTTGCACCTTGGTTTTCATATAGTAGCCGTACTGCAATTCGTCGCAGGTTCAATTTAGAGGGAAGTTGCGAGGCACTGAATAGGTCATGTGGGTGCTGCGGAAGCTATTTGGAAGATGAAGTGCAGCGTGAACAGTGTGAGTCAACATGTGACCTTGCAACTCACGTATTTTGTCATGTCTGTGCTCTCTGTCAAGAAGGTCGTGAGCTCCGCCGCAGAGTGCCCCATCCTGGCTTCAATGCGCAACCAGTATTGGTTATGATCCCCCCAGGAGAGCAGAGCATGGGTCGTGAAGCTTGA 354 0.4887 MHYSGLYVIGNSCCGYNALAPWFSYSSRTAIRRRFNLEGSCEALNRSCGCCGSYLEDEVQREQCESTCDLATHVFCHVCALCQEGRELRRRVPHPGFNAQPVLVMIPPGEQSMGREA 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04227 117 Pfam PLAC8 family 13 87 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04227 Trre-Chr13 49939846 49943346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04227 - - gmx:100801509 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04227 13 49939846 49943346 Trre13g04227 13 49939846 49943346 ECH