Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04214 ATGGGTTCAGTAGAAAGGTCAAAGAAAAAAACTCATTTGTGGAAAAAAGCAATGCTTCATTTTTCTCTATGTTTTGTGATGGGTTTTTTTACAGGTTTAGCTCCATCAGGTAAATCTTTAATTTTTCCTAGCAAAATTGAAATTTCAAATGGAACAAAATTTGTAGCACCTCAACCTTCTCAAATGTCAACAAAAAATGTTAACAAAAGTTGGATAGCATCAGCACCACAAATTCATAGCCAAAAAACATCAACAAAAACAACAAAATTGCATGTAAAATCACTACCTCAATTGAAGCCTAAAAGACTTGTAATCATAGTAACACCAACAAGCACAAAACTACCTTATCAAAATGTTTTTTTAAGAAGGTTAGCAAATACTATAAAGCTTGTTGATCAACCATTGCTTTGGATTGTTGTCGAAGCGAAAACCGATTCAACGGAATTGTCGGAAATATTAAGGAAAACTGGTATTATGTATAGACATGTGGTTTATAGTGAAGAGTTCATGGATTTAGAAGCTGAATTGAATCATCAAAGAAATTTAGCACTTGGTCACATTGAACATCATAGATTGAGTGGAATTGTTCACTTTGCTGGTCTTTCTAATGTTTATGATCTTCAATTCTTTCAACAGCTTAGAGATATTGAGGTGTTTGGGACATGGCCAACAGCACTATTACTTGCAAACAGAAAAAGAGTGATAATTGAAGGACCTGTATGTGATTCATCTAAAGTCATTGGATGGCATTTAAGAAATATGAACAATGAGACAATTACTTCTCCCATTCATATTTCAAGTTTTGCATTTAATAGCTCTATCCTTTGGGACCCTGAAAGATGGGGTCGCACTTCCTCTGTTAAAGACACTTCTCAGAATGCAATCAAGTTTGTGAAGCAAGTAGTACTAGAAGATGAAGCTAAGTTGAAGGGAATTCCACCAGATGATTGCTCCAAAATCTTGTTATGGCGTTTCAACTTTTTTTATACACACACCATTTCCAAGCACTAA 1011 0.3412 MGSVERSKKKTHLWKKAMLHFSLCFVMGFFTGLAPSGKSLIFPSKIEISNGTKFVAPQPSQMSTKNVNKSWIASAPQIHSQKTSTKTTKLHVKSLPQLKPKRLVIIVTPTSTKLPYQNVFLRRLANTIKLVDQPLLWIVVEAKTDSTELSEILRKTGIMYRHVVYSEEFMDLEAELNHQRNLALGHIEHHRLSGIVHFAGLSNVYDLQFFQQLRDIEVFGTWPTALLLANRKRVIIEGPVCDSSKVIGWHLRNMNNETITSPIHISSFAFNSSILWDPERWGRTSSVKDTSQNAIKFVKQVVLEDEAKLKGIPPDDCSKILLWRFNFFYTHTISKH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04214 336 Pfam Glycosyltransferase family 43 124 326 IPR005027 GO:0015018|GO:0016020
Trre13g04214 336 SUPERFAMILY Nucleotide-diphospho-sugar transferases 102 331 IPR029044 -
Trre13g04214 336 FunFam Glycosyltransferases 102 336 - -
Trre13g04214 336 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 101 334 IPR029044 -
Trre13g04214 336 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 325 IPR005027 GO:0015018|GO:0016020
Trre13g04214 336 CDD GlcAT-I 102 327 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04214 Trre-Chr13 49834489 49836906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04214 1 327 Glycosyltransferase AT2G37090 60.756 1.33e-145 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04214 K20869 - gmx:100785607 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04214 13 49834489 49836906 Trre13g04214 13 49834489 49836906 ECH