Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04205 ATGATTTCCGAATCAGAAGCTTCTCCGAGAAAGAACGATGTCAAAGATCGACGCCTCAGCATCATCGACTTTTTGTCCGCTGATGATTCACTTCTCGATCCCGTTTCTCCCAATCACCTACAGAATTCAGAAAACGAAGCTTGGTACACTCCGAATTCAAAAAAGTTTGAAGATGCTGCTACCAAAATTGAACAGTGGGAAAATGAACCTCTAACATCTGGAACAAAGACCAAGAAAAACCCTAAATGTAATTTGCGGAAGAGTTTAGCTTGGGACAGTGCTTTTTTCACTAATGCTGGGGTTTTGGATGCTGAAGAATTGTCTAGTATAATTGAGGGTGTTGAGAAGGAAGAATTACCAAGGATTGAAGAAGATGTGTACAAATCATGTGATTCCATTTCGACGTTAGGGAGTGATTGTTTGACCCTTGAAAGTGTTGAGTTGGAGGGTGATTTGTTTGAGGATGTTAGAGCTTCGATTCAGAAATCTAGCCGTAAGTCCAAACTTGCATCTGCAGCAACCAGAGTGTCATCTACCTCTCGGCTGCCGGGGTTACAAACTCGTGACTCTTCTAGAAAAACTAGTGCAGTACCTCGCGACAAGATGAAGGCCCCACCTGCTTCTAGGAATCCAACAGCTGTTGTGAGAGGAATTGGGAAGTCGACAACCAAGAATAATCCTACTTTCACACAGATTCCACAGCCCGTCGCCACGAGAAGGGAGTCATCTATTTCAAAACTATCGAAGGTACCAGCAAAGCCTAGTGCAAGTTCCACAATTTCATCCAAAAGAGCATCACTTAGTGATCTGCATGTCAAAAGTGAAATGGACAAGGCAAAACTCATAAATGGTGGTAGAGTCAGATCAATGTCAAAAGCATCTGTTATTGGAGGTTCGCGGGGTACAGTGCCTAAGCCCACGGTATTGTCCAAATTAACTTCCGGTCAGTCGGTATCATCCAAGGCAAAATCAGAAACTTCCACACCTTCTGGTGTCAATTTATCTGATAATGTTGGTAAATCTCCATTTAATTCTGCAAGAAAAAAAGTTATTGCCGGAACTACAAAACTGCCCTCATCTCGCCCTCCTGTCAGAACACCATCAGGATTTGCTTCAAGAAATAAATCTGAATCTGGGAATTCTAGTCTCTCAAGCTTGATTTCTGTCAACAAGCTTTCTTCTAGCGTTTCACCTGCTAGCTCTGTTAGTGACTGGTCTTCAGAGGCATCCGTATCAACTTCTATACCTACACACATGTGTGATAGTTTAAGGTCCAGCATTGATAGTACCTCCAGCAGAAAGGTTTTATCAGACACTAACGTGGATCAAGGTGTAAATTCTCAAATTCCTCAGAGTGATATGAGCTTAGAAAAGCAAAAGGCTCAGAACACTGGAATTATCAGTCAAAGTGCAAGGACTGCTTCTGTGGCGACCGTTATTCCCACAGCTCTTGCAAAACCTTCAGGCCTGCGACTACCTTCACCAAAAATTGGTTTCTTTGATGGGGTGAAATCTTCAGTGCGCACTCCACGCGGGGGAGCTCAACCAAACTCTGCGGTGCCTCATAGCTTGCTAAAGCGTGGAGCAGGAAGTCCAAGTGAAGGCCAAAACAAAGCAAAGCTTGGAAAGCTGCAAGCAGTGAGATCTATCACACCAACTCAAAGCAAAAAACCGAATAACCAGCAAACCCCGCATCCAAATAATGTTGGTGAATCATTAGATGTTGCAATTAAGACATCTAGTGCAGATCATAATGTCAAAAGCTCTTCTGAAATGCTCAATGTTGCTAATAAAAATGTTGAATATACACCACTTTCGCAAGAAATGGAGAGACCTAATTATGATTTGCGTCCACTTACCCCTGTTGATCACCAGGAGAATGTCTATCATGATGATCAAGTTGATTGTTTGATTAAACAAGTTGGACTCATGGACATAAATTCCAAGACACTGGTAAATATCAACGGCGATTCTCTTTCTTTTTGTGAGACTGATGTCAGCTTCCAAGATAAATCCAATGGTACGGAGTTATCAACTCACAAGGAGCTTTTTGATCATCCTAAAAACCAGCAATTCTTGAAGGGTTCGTCTACTCCATATCTCTGTGTCACTCCAACCAGCATTGATATGGCAACTTCAGTAAGAATACCCTTTGCTGCAAAAGATTCATTTTGCAATATGGATTCCAGTGTTTTCACAGAACCAACAGTTTCAGAGGTAAAACTGGCCAACTTACCTGTGCCCGGAAGCATTACGCAAGAAAAAGTTCAGATGATATGA 2280 0.4224 MISESEASPRKNDVKDRRLSIIDFLSADDSLLDPVSPNHLQNSENEAWYTPNSKKFEDAATKIEQWENEPLTSGTKTKKNPKCNLRKSLAWDSAFFTNAGVLDAEELSSIIEGVEKEELPRIEEDVYKSCDSISTLGSDCLTLESVELEGDLFEDVRASIQKSSRKSKLASAATRVSSTSRLPGLQTRDSSRKTSAVPRDKMKAPPASRNPTAVVRGIGKSTTKNNPTFTQIPQPVATRRESSISKLSKVPAKPSASSTISSKRASLSDLHVKSEMDKAKLINGGRVRSMSKASVIGGSRGTVPKPTVLSKLTSGQSVSSKAKSETSTPSGVNLSDNVGKSPFNSARKKVIAGTTKLPSSRPPVRTPSGFASRNKSESGNSSLSSLISVNKLSSSVSPASSVSDWSSEASVSTSIPTHMCDSLRSSIDSTSSRKVLSDTNVDQGVNSQIPQSDMSLEKQKAQNTGIISQSARTASVATVIPTALAKPSGLRLPSPKIGFFDGVKSSVRTPRGGAQPNSAVPHSLLKRGAGSPSEGQNKAKLGKLQAVRSITPTQSKKPNNQQTPHPNNVGESLDVAIKTSSADHNVKSSSEMLNVANKNVEYTPLSQEMERPNYDLRPLTPVDHQENVYHDDQVDCLIKQVGLMDINSKTLVNINGDSLSFCETDVSFQDKSNGTELSTHKELFDHPKNQQFLKGSSTPYLCVTPTSIDMATSVRIPFAAKDSFCNMDSSVFTEPTVSEVKLANLPVPGSITQEKVQMI 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04205 759 MobiDBLite consensus disorder prediction 508 543 - -
Trre13g04205 759 MobiDBLite consensus disorder prediction 291 382 - -
Trre13g04205 759 MobiDBLite consensus disorder prediction 164 192 - -
Trre13g04205 759 MobiDBLite consensus disorder prediction 164 266 - -
Trre13g04205 759 MobiDBLite consensus disorder prediction 306 342 - -
Trre13g04205 759 MobiDBLite consensus disorder prediction 215 266 - -
Trre13g04205 759 MobiDBLite consensus disorder prediction 359 382 - -
Trre13g04205 759 PANTHER OS05G0121800 PROTEIN 16 595 IPR045882 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04205 Trre-Chr13 49793612 49797115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04205 - - gmx:100809816 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04205 13 49793612 49797115 Trre13g04205 13 49793612 49797115 ECH