Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04195 ATGGCTTCCTCTCCTTCTACAACACTTTTGTCAAATTCTCTTCACATTAACCAAATTGCAAATCACTATAAGCTGTTAAATCTATATCCCACCACACTTTCATTAAATCAAAACCTTCCAATATATTCTAAGAATCCACTCAAACTTTCAACTACTATCTTGAAGCATCATGTACCCTTTGCTTCTGGTTCTGCAGGAGTTGAGTCTCCAGTGTTGAGTGAGGATACCTCAAGTTCACTGGATTTGGTGAAAGTGTTTGATTTGGAAGGAAATGGGATTCCAATTTCTGACTTGTGGAAAGATAGGAAAGCCGTTGTGGCGTTTGCTCGTCATTTTGGGTGTGTACTTTGCCGCAAAAGGGCTGATTATCTTGCATCCAAGAAGGATATAATGGATGCATCCGGTGTAGCACTTGTATTGATTGGACCTGGCAACATTGATCAGGCCAAATCCTTTGCCGAGCAAACAAAATTCAAAGGAGAAATCTATGCAGACCCTGCTCAAGCTTCATATGAGGCCTTGAGATTTGTTTCTGGAGTTCTTACCACATTTACCCCCAAAGCAGGTCTTAAGATAATAGAATTGTACATGGAAGGTTATAGACAAGATTGGAAGCTATCATTTGAAAAAGATACTGTTAGCAGAGGAGGCTGGCAACAAGGAGGAATTATTGTTGCAGGTCCTGGTAAAGGTAACATCTCATATATTCACAAGGACAAAGAAGCAGGTGATGACCCGGAGATTGAAGATATCTTAAAAGCATGTTGCTCGTGA 774 0.4031 MASSPSTTLLSNSLHINQIANHYKLLNLYPTTLSLNQNLPIYSKNPLKLSTTILKHHVPFASGSAGVESPVLSEDTSSSLDLVKVFDLEGNGIPISDLWKDRKAVVAFARHFGCVLCRKRADYLASKKDIMDASGVALVLIGPGNIDQAKSFAEQTKFKGEIYADPAQASYEALRFVSGVLTTFTPKAGLKIIELYMEGYRQDWKLSFEKDTVSRGGWQQGGIIVAGPGKGNISYIHKDKEAGDDPEIEDILKACCS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04195 257 FunFam Thioredoxin-like protein AAED1 chloroplastic 78 256 - -
Trre13g04195 257 Pfam AhpC/TSA antioxidant enzyme 124 240 IPR032801 -
Trre13g04195 257 SUPERFAMILY Thioredoxin-like 81 177 IPR036249 -
Trre13g04195 257 PANTHER - 62 257 IPR032801 -
Trre13g04195 257 CDD PRX_like2 83 240 - -
Trre13g04195 257 Gene3D Glutaredoxin 78 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04195 Trre-Chr13 49690337 49692621 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04195 - - vra:106757624 415.616