Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04193 ATGGCGGCCATAACCCGCCTCGTTAAACGCACAACACCTTTTTATTCCTTAGCGCGTGGATTCTCATCCACTATTTCTCACGCGCCTCCGCGTCAAAATAGGAATATTCAGTGGGTCTTTTTGGGTTGTCCTGGCGTCGGTAAAGGCACCTACGCCAGCCGTCTCTGTAATCTTCTCGGCGTTCCTCACATCGCTACTGGAGATCTTGTTCGTCATGAGCTTTCTTCCAATGGCCCTCTTTCTTCTCAGCTATCAGAAATTGTAAATCAAGGTCAATTAGTGTCAGATGAAATTATCATGAACTTGTTGTCTAAGAGACTGGCCGATGGACAAGCCAAAGGCGAATCAGGTTTCATTCTCGATGGTTTTCCTCGAACAATAAAGCAAGCAGAAGTTTTGGAAGAAGTGACTGACATTGACTTGGTGGTCAATCTTAAGCTCCGAGAAGAAGCACTGCTTGCAAAATGCCTCGGTAGGAGAACTTGCAGTCAGTGTGGAGGAAATTTTAATGTTGCTTCCATTAACATAAAGGGTGAGAATGGGGGCCCTGGAATGAGTATGGCTCCACTTCTTCCTCCTGAGCATTGTATGTCTAAGCTCATTACTCGTTCTGATGATACCGAACCAGTAGTCAAAGAAAGGCTTCGTATATACAATGAATTGAGTCAACCCGTGGAGGGATTTTACCGTAGTAGAGGAAAACTATTGGAGTTTGAGCTGCCTGGAGGGATCCCAGAATCTTGGCCAAAGTTGCTGCAAGCTCTTAATCTAGATGATTATGAAGAGAAGCAGTCTGCTGCAGCATAA 807 0.4523 MAAITRLVKRTTPFYSLARGFSSTISHAPPRQNRNIQWVFLGCPGVGKGTYASRLCNLLGVPHIATGDLVRHELSSNGPLSSQLSEIVNQGQLVSDEIIMNLLSKRLADGQAKGESGFILDGFPRTIKQAEVLEEVTDIDLVVNLKLREEALLAKCLGRRTCSQCGGNFNVASINIKGENGGPGMSMAPLLPPEHCMSKLITRSDDTEPVVKERLRIYNELSQPVEGFYRSRGKLLEFELPGGIPESWPKLLQALNLDDYEEKQSAAA 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04193 268 ProSitePatterns Adenylate kinase signature. 118 129 IPR033690 -
Trre13g04193 268 CDD ADK 37 239 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre13g04193 268 PANTHER NUCLEOTIDE KINASE 28 253 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre13g04193 268 NCBIfam adenylate kinase 37 256 IPR006259 GO:0004017|GO:0005524|GO:0016776
Trre13g04193 268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 256 IPR027417 -
Trre13g04193 268 Pfam Adenylate kinase 41 233 - -
Trre13g04193 268 Hamap Adenylate kinase [adk]. 36 256 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre13g04193 268 Gene3D - 22 259 IPR027417 -
Trre13g04193 268 PRINTS Adenylate kinase signature 118 134 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre13g04193 268 PRINTS Adenylate kinase signature 39 52 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre13g04193 268 PRINTS Adenylate kinase signature 67 81 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre13g04193 268 PRINTS Adenylate kinase signature 203 218 IPR000850 GO:0005524|GO:0006139|GO:0019205
Trre13g04193 268 PRINTS Adenylate kinase signature 220 234 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04193 Trre-Chr13 49678287 49680594 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04193 K00939 - gmx:102666238 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04193 13 49678287 49680594 Trre13g04193 13 49678287 49680594 ECH