Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04139 ATGGCTTCCGTCACTATTCATCGCGACGAAGAAACGCCATTGGTTACCGATGATGAATCACCGATTCAAGTTCATATTCCTAAAAGTCACACCAGAGATGTTCATATTTTGAGCTTAGCGTTTTTGTTGATCTTTCTAGCTTATGGTGCTGCTCAAAATTTGCAGAGTACTCTTAACACTGAGGAGGATTTGGGTACGACTTCGCTTGGGATACTATATTTGTCTTTTACATTTTTTTCTGTGTTTGCTTCTTTGGTGGTGCGGATTTTAGGATCGAAGAATGCTTTGATTATTGGTACATCTGGTTATTGGTTATATGTGGCTGCAAATTTGAAGCCGAATTGGTATACACTGGTTCCGGCCTCTGTGTATCTTGGGTTTTGTGCTTCTATAATATGGGTCGGACAGGGAACATATTTAACTTCCACTGCACGCAGTCATGCTACAGACAACAATTTCCACGAAGGTGCAGTAATTGGTGACTTCAACGGGGAATTCTGGGGTGTGTATGCACTCCATCAGTTTATTGGAAATCTTATTACATTCGCTCTACTCAGTGATGAGCAGGGGGGAAGTACCAACGGCACAACTTTATTGTTTGTTGTGTTCCTTTTCGTTATGACCTTTGGTGCAATACTAATGTGCTTCCTGCATAAACGGAGTGGAAATAGTAAAGAAGGATACAAGGATTCAGAAGCGGGTACTGGTGAATCAAAGTCACTTAAGTCTCTATGTAAATCACTCACAAGTGCATTGTCTGATGTGAAGATGTTATTGATCATACCCCTTATAGCATATTCAGGTCTACAACAAGCATTTGTATGGGCTGAATTTACCAAGTATGTTGTAACTCCAGCAATTGGTGTTTCTGGTGTTGGTATTGCAATGGCATCATATGGGGCTTTTGATGGAATATGTTCCCTGGCTGCTGGTCGGCTCACCACTGGTCTCACATCCATTACATCAATAGTTTCTTTTGGAGCTTTTGCTCAGGCGGTTGTACTAATCTTACTTCTGCTAAATTTCAGCATATCTAGCGGATTTCTCGGTACTTTATATATACTCTTTTTGGCTGGTTTATTGGGTGTCGGTGATGGAGTTCTAATGACGCAGCTCAATGCTTTGCTCGGAATGCTATTTAAGCATGACATGGAAGGGGCTTTTGCACAGCTAAAGATATGGCAAAGCGCTACAATTGCTATCGTTTTCTTTTTGGCCCCGTACATTTCGTTCCAAGCAGTTATCATTATCATGTTGGTTTTACTATGCTTGTCATTCTGCAGTTTTCTATGGTTGGCTCTCAAGGTAGGGAATGCATCATCACCTTCCACCAGTGAATGA 1341 0.4131 MASVTIHRDEETPLVTDDESPIQVHIPKSHTRDVHILSLAFLLIFLAYGAAQNLQSTLNTEEDLGTTSLGILYLSFTFFSVFASLVVRILGSKNALIIGTSGYWLYVAANLKPNWYTLVPASVYLGFCASIIWVGQGTYLTSTARSHATDNNFHEGAVIGDFNGEFWGVYALHQFIGNLITFALLSDEQGGSTNGTTLLFVVFLFVMTFGAILMCFLHKRSGNSKEGYKDSEAGTGESKSLKSLCKSLTSALSDVKMLLIIPLIAYSGLQQAFVWAEFTKYVVTPAIGVSGVGIAMASYGAFDGICSLAAGRLTTGLTSITSIVSFGAFAQAVVLILLLLNFSISSGFLGTLYILFLAGLLGVGDGVLMTQLNALLGMLFKHDMEGAFAQLKIWQSATIAIVFFLAPYISFQAVIIIMLVLLCLSFCSFLWLALKVGNASSPSTSE 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04139 446 CDD MFS_unc93_like 34 435 IPR044771 GO:0055075
Trre13g04139 446 Gene3D MFS general substrate transporter like domains 29 229 IPR036259 -
Trre13g04139 446 Coils Coil 446 446 - -
Trre13g04139 446 SUPERFAMILY MFS general substrate transporter 17 433 IPR036259 -
Trre13g04139 446 PANTHER UNC-93 RELATED 27 441 - -
Trre13g04139 446 Pfam Ion channel regulatory protein UNC-93 64 430 IPR010291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04139 Trre-Chr13 49254741 49259231 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04139 - - gmx:100802740 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04139 13 49254741 49259231 Trre13g04139 13 49254741 49259231 ECH