Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04128 ATGTCACAAATATCAACAATTGCTAAAACAAGGACAGAGCTATGTCGAACTCGTCTTGGCTCGGCTCTAAGAACATTCTTAGCATGCAGCATAGTTGGTTGCACTGCTCTATATGGCCCTCAACCTATAAAGCATTACATTAAATATCCATCTATTGCTTATGTGACAACAATTCTTATAGTGTCCGATGCAACACTTGGCGACACTATTAGAGGTTGTTGGCATGTTTTATTAGCAACCATTCAGGTTATGGTTTTTTCTCTACTTAGCTTGCAAGTGATAAGACCCGGTCGTCACTTAGGCGATTATATGGCTGCGCTGGCCGTGGCTACCGTTCTACATGGTGCTCAAGAAGGAGTGGCTAGGCAATCAATTTATGTGGCTAGTTCCACTGCACTTGGAGCTATAGCTTCTGTTCTTGCCATGTTGCTACCTTATCCTCGATTTGCTTACAATGAGGCAAGGAAATTCTACCAATTATACTCTGAGAATACATCTGAGAGATTAAATTGCAATATAGAAGCCATCTCTGCCTCAGACAACTCAACTGCTGTTGGTTTTATAACTCAAGCCAAGTACCTCTCCACAACAGGAGACAAGCTACTCCAGAGTATCACATCTACACTGGATGGTATGCATTGGGAACGACCTCAAACAATAATTTCCAACTCCTGTTGCAATGACCCAGAAGACAAACTGCAAGATATGGATATACCGATTAGAGGGATGAACATTGCTCTGTCGAGTGGCATGTCTTTTCCTGTTGGTGTCATTGATGAAGAGCTCAAAGGTGTTCTGCTTAATTGCAGAGGACAAATCAGCCAAAAATTAGATCAACAAGCTGAGTGCTTTGTTCCTTTTGATGCAACCACATCTCAAGAAATGAAACAAGACATTTTTGACAAATACCATTCCATAGCCTACAAACATCTCCCAACCTCATTCTTTTTATACTGTGTGCAACTTCTCCTAGATGACTTGTCTATTTCAAAGAAAATTGACCATGTGCAGAAGAAAACTCAGAAAAGCGATGATTCCCAATGGTGCTTCAACAGGATAAGGCAGCTTTTGATGAACTTAATTCCCAGCAACCAAAGCTTGGTCTTTGCATTCAAGTCCTCTCTGTCATTAGGCTTTGCTGTGTTGTTTGGTCTGTTATATGACAGGGATAATGCATATTGGTCAGGACTCACAATTGCAATCAGTTTCGTGACTGGACGACAACCAACGTTCGCAGTTGCAAATGCACGAGGACAAGGAACAGCTATAGGATCAATCTACGGGATCATTTGTAGCTTCATTTTCCAAAAAATTTCCCAAAAATTTATGGATTTAAGGTTCTTAGCTCTTATACCATGGGTCATGTTCGCTTCTTTTCTCAGGCATAGTAAAATGTATGGTGAATCTGGGGCAATTTCGACAGTTATAGGAGCTCTGTTGATCCTTGGTAGGAAGAACTATAGTACACCGACTCAGTTTGGAGTTGCTAGAATGGCCGAGGCTACAATAGGACTCACTTGCTTCATCATCGTAGAGATTATATTAAGTCCCTCAAGAGCTGCAACTCTAGCAAAGTCAAAACTTTCTCAAACCTTGAGAACCCTTCAAGATTGCACTAAGAAGATTGCCATGATTACCCCTAGCGAAGGCGAAAGAGATATGTCATCTTCAAGTTATCAAGCACTGAGAGAAGAACAGGAGAAACTTAAATCTCTTGTGTGTCAATTAAAAGAATTTACAGCAGAAGCTGAGATGGAGCCAAATTTCTGGTTTGTTCCATTTCATACTGCCTGCTACAACAATATGCTGGGATCTCTATCAAGGATGGTAGATCTCTTGCTTTTTGTGGCATACTCAATGGAGCATGTCACACAATTGGCACAGAAAGATGGAGTAATTTGGATGGACATCCAAGGTCGAGGGAATGAGAATGTGAAGATTTTTAAGAACAAAGTAGACCCCATATTGAAAGGCCTGGAAGAGATAACAAGGATGAAGTCTATTAAGAAACTTGAAAATGAGTTGAAGAACCGAAATGTTCCTCGGGATCTTGAGTCACAAGAATATCCCAATGCAGACACATTTAGCATCTTAAGCAAAGATGATGAGGTTGATAGCATTACAAACTCTTTCCTCCAACATCTAGAGGAAATTGCTAACAAGACTTATACTGACAAAGATGAGGAGATGCTTAAAGTTCAGATGCTTTTTCATTACAGCTGCTTGGGATTCTGCACTGGTAGCTTGATGAGAGAAACAATGAAGATTGAGGGTGAAATAAAGGAACTACTTTTGTGGGAGAACCCCTCAAGTCAAATAAACTTCATCCAAAAAAGATCAGAGTAA 2346 0.4045 MSQISTIAKTRTELCRTRLGSALRTFLACSIVGCTALYGPQPIKHYIKYPSIAYVTTILIVSDATLGDTIRGCWHVLLATIQVMVFSLLSLQVIRPGRHLGDYMAALAVATVLHGAQEGVARQSIYVASSTALGAIASVLAMLLPYPRFAYNEARKFYQLYSENTSERLNCNIEAISASDNSTAVGFITQAKYLSTTGDKLLQSITSTLDGMHWERPQTIISNSCCNDPEDKLQDMDIPIRGMNIALSSGMSFPVGVIDEELKGVLLNCRGQISQKLDQQAECFVPFDATTSQEMKQDIFDKYHSIAYKHLPTSFFLYCVQLLLDDLSISKKIDHVQKKTQKSDDSQWCFNRIRQLLMNLIPSNQSLVFAFKSSLSLGFAVLFGLLYDRDNAYWSGLTIAISFVTGRQPTFAVANARGQGTAIGSIYGIICSFIFQKISQKFMDLRFLALIPWVMFASFLRHSKMYGESGAISTVIGALLILGRKNYSTPTQFGVARMAEATIGLTCFIIVEIILSPSRAATLAKSKLSQTLRTLQDCTKKIAMITPSEGERDMSSSSYQALREEQEKLKSLVCQLKEFTAEAEMEPNFWFVPFHTACYNNMLGSLSRMVDLLLFVAYSMEHVTQLAQKDGVIWMDIQGRGNENVKIFKNKVDPILKGLEEITRMKSIKKLENELKNRNVPRDLESQEYPNADTFSILSKDDEVDSITNSFLQHLEEIANKTYTDKDEEMLKVQMLFHYSCLGFCTGSLMRETMKIEGEIKELLLWENPSSQINFIQKRSE 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04128 781 Pfam Fusaric acid resistance protein-like 380 511 - -
Trre13g04128 781 Coils Coil 562 582 - -
Trre13g04128 781 PANTHER P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED 11 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04128 Trre-Chr13 49081374 49087169 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04128 - - aprc:113863134 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04128 13 49081374 49087169 Trre13g04128 13 49081374 49087169 ECH