Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04103 ATGGCGGAGCCACCGCGTCCGCCTCCTTCTCTCACTTCTCTATGCATAGATGATCTCGCCAGAGAACTCCTCTCCGGGGATGGTTATGTTGTTCATATTATTCAAGATATATATGAGCTTCCGTCACATTTACTTGATGAATTAATCTCGCGTTTACCTCCTTTTGCATTGTACAATTTCAATCTTCATATGCCATTTCAGGATCCAAATAAGGAAGATTTTCCGCACGATGACTCAACAAACAACAAGAGAAAACGTTCCAGGGATTGGAATCTAAATACAGCTTGGCAGAAGTTGTTTAAGTTACGGTGGCCTAATATCATTGATCAGATCCAACCCACCGACTGGCAGCAAGCATACTGGGAAACCCATTTGCAAAATTGTCTGGATGAAGCAGCAGAGATAGCACTAATCACATCTTTTAAAGGACGTATTGGTGACATAGAGATTTCAGACAGCATACTGTGCTATATTGGTTTTGTGGGACTTACAAAACAAAAATACAGTAAATATTCAAAACTCTCTTATCATTGCCTACAATTTTCTAGCCATGTGAGTTGTCTGACACTGCAGAATGTTCTGTGCACTGCAGAAACTACTCGTTTGTTGAGGGAATGCAAGCTGCAGAGTCTGGTGCTAAGATGTATCCGATCTAAGGAACAGGTTGATGGATTATGCAAACTTATCACTCAACATAGCAGAACATTAACGTCGCTGGAGTTTATTCACTGCACAGTCTACGAAGATTTTATTAATGCAATACTCGATTCTGTTGGCATAAAGGGCGTACCAAAACATGGGATCCGACACCTCTCAATCGTGTCCTCGAGTTTTGGAAAATGTACCGTTTCTTTACCTAGTGGGCTTGAATCATTTTTGTCTTCAGCAAGGTCCCTGTGCTCATTAAAACTCTTTGACAATCGCCTTGGACGTAATTTTGCAAAAGCTCTTTTTGTGAATCTTGTCGAAGCTTCTTCTGGCATATCTGTCCTTGACCTTTCTGAGAATGAAATAGCAGGATGCCTTTCTTGCTTTAACAAGAGACTATCTTGTGGTTCACATCTGTCTCGTGGAATTGGAAAGTCCTTGCAACTGTTGCGTGTACTCAACCTGAGGGGGAACAATTTACGGAAAGATGACGCAGTAAATCTTGGATATGCTCTTGCGTACATGCCTAACTTGGAGGACCTAGATATAAGCGACAATTCAATTGGAGATGTCGGAATCGGGTATTTAACCCCGTATTTTGCTGCAACATCTCAAACGTGCTGCCGCTTGGCTTGTTTGAAGTTAGAGTCTTGTGAACTGTCCGCTGAAGGAGTTAATCATCTTCTAGATTCGCTTCCTACACTCAATGGACCATTGAAGTCTCTTTCCATTGCTGAAAATTACCTTGGGAGCAAAGTAGCAGGAGCTTTGGGAAGATTTTTGAGCACACCTATCGAAGTAGTAGATGTTGCAGGCATTGATTTCCGTCCATCTGGTTTTCAAGAGCTTCAAAATATGCTGCTGATAAAAGAGGATCTTAAATTGGTGAAAATTAATATAAGCAAAAACCGTGGTGGGATTGAAACTGCCAAGTTTTTGTCAAAACTCTTGTCACAGGCTCCCCAACTAGTTGATGTGAATGCAGCAAGTAATTGTATGCCTATTGAATCACTGCCCATTATCTCCTCTGCATTAAAAATTGCTAAAGGTAATGTTCAGCGTTTGGACTTGACGGGGCATCAATGGGACTATAAGCCAGAGCATGCTTCCCTACGCACTGAATTTGTAAATAATGGAAAACCTATATTGATTCTTCCACCATCATCATTCACTGCTGCTCCTTGTGATCATGACCCTTAG 1848 0.4145 MAEPPRPPPSLTSLCIDDLARELLSGDGYVVHIIQDIYELPSHLLDELISRLPPFALYNFNLHMPFQDPNKEDFPHDDSTNNKRKRSRDWNLNTAWQKLFKLRWPNIIDQIQPTDWQQAYWETHLQNCLDEAAEIALITSFKGRIGDIEISDSILCYIGFVGLTKQKYSKYSKLSYHCLQFSSHVSCLTLQNVLCTAETTRLLRECKLQSLVLRCIRSKEQVDGLCKLITQHSRTLTSLEFIHCTVYEDFINAILDSVGIKGVPKHGIRHLSIVSSSFGKCTVSLPSGLESFLSSARSLCSLKLFDNRLGRNFAKALFVNLVEASSGISVLDLSENEIAGCLSCFNKRLSCGSHLSRGIGKSLQLLRVLNLRGNNLRKDDAVNLGYALAYMPNLEDLDISDNSIGDVGIGYLTPYFAATSQTCCRLACLKLESCELSAEGVNHLLDSLPTLNGPLKSLSIAENYLGSKVAGALGRFLSTPIEVVDVAGIDFRPSGFQELQNMLLIKEDLKLVKINISKNRGGIETAKFLSKLLSQAPQLVDVNAASNCMPIESLPIISSALKIAKGNVQRLDLTGHQWDYKPEHASLRTEFVNNGKPILILPPSSFTAAPCDHDP 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04103 615 SMART LRR_RI_2 363 390 - -
Trre13g04103 615 SMART LRR_RI_2 391 418 - -
Trre13g04103 615 SMART LRR_RI_2 508 535 - -
Trre13g04103 615 SMART LRR_RI_2 423 450 - -
Trre13g04103 615 SUPERFAMILY RNI-like 199 583 - -
Trre13g04103 615 Pfam Leucine Rich repeat 392 409 IPR001611 GO:0005515
Trre13g04103 615 Gene3D Ribonuclease Inhibitor 343 589 IPR032675 -
Trre13g04103 615 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 8 615 - -
Trre13g04103 615 Gene3D Ribonuclease Inhibitor 163 342 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04103 Trre-Chr13 48909077 48927167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04103 - - mtr:11441496 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04103 13 48909077 48927167 Trre13g04103 13 48909077 48927167 ECH