Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04098 ATGGAGAATTTATTTCGTCTAGCGGATCACCAAGACTTTTTCTCACGCCGTTGCATTTGGGTCAATGGACCTGTGATCATAGGTGCAGGTCCATCAGGCCTGGCAACGGCAGCATGTCTTCGAGAACAAGGAGTACCTTTTGTTGTTCTCGAAAGAGCTGATTGCATAGCATCACTATGGCAAAGAAGAACATATGATAGATTAAAACTTCATCTCCCAAAACAATTTTGTCAACTACCTTACCTTCCATTCCCTGATGATTTCCCTGAATACCCTTCAAAGAAACAATTCATAAACTACCTTGAAACTTATGCAAACAAATTTGAAATCAACCCGCAATTCAACGAGTGTGTTCAATCTGCTAAATATGATGAAACAAGTGGATTATGGAGAGTTAAAACCAATGAAGTTGAATATATTTGTAGGTGGCTAGTTGTTGCTACCGGCGAAAATGCCGAGCGTGTTACTCCCGAAATCGAAGGACTTTCTGAATTCAAAGGTGAAGTTGTTCATGCTTGTGATTACAAGTCAGGTGAAAATTTCACAGGAAAGAAAGTTCTAGTTGTTGGATGTGGAAATTCTGGAATGGAACTCTCACTTGATCTTAGCAATCACCATGCTTTACCTTCAATGGTTGTTCGTAGCTCGGTTCATGTCTTACCAAGAGAAATATTTGGAATATCAACTTTTGAATTAGCAGTTATGATGTTAAAATGGTTACCACTTTGGATTGTTGATAAGCTTCTATTGATCTTAACATGGTTTATTTTGGGTGATATGGAAAAATATGGTATCAAAAGACCTTCAATGGGTCCTTTGCAATTGAAGAACACAGAAGGAAAAACTCCAGTATTAAATATTGGTACTTTCGACAAAATTAAATCCGGTGATATTAAAGTTGTTCCTGGAATCAAAAGGTTTAATAATAATGGTGAAGTTGAACTTGTTAATGGTGAAATGCTTGATATTGATGCTGTTGTTCTTGCTACTGGTTACCGCAGCAATGTTCCTTCTTGGCTTCAGGAAGGTGAATTTTTCTCCAAAAATGGATACCCAAAAATGCCATTTCCACATGGTTGGAAAGGAAATTCAGGACTATATGCAGTAGGGTTCACAAAGAGAGGGCTTTCTGGTGCTTCATCTGATGCTGTTAAAATTGCACAAGATATTGGAAAAGTTTGGAAACAAGAGACAAAACAAAAGAAGCAAAGAACTACTGCTTGTCATAGACGTTGCATTTCACAATTCTAG 1251 0.3765 MENLFRLADHQDFFSRRCIWVNGPVIIGAGPSGLATAACLREQGVPFVVLERADCIASLWQRRTYDRLKLHLPKQFCQLPYLPFPDDFPEYPSKKQFINYLETYANKFEINPQFNECVQSAKYDETSGLWRVKTNEVEYICRWLVVATGENAERVTPEIEGLSEFKGEVVHACDYKSGENFTGKKVLVVGCGNSGMELSLDLSNHHALPSMVVRSSVHVLPREIFGISTFELAVMMLKWLPLWIVDKLLLILTWFILGDMEKYGIKRPSMGPLQLKNTEGKTPVLNIGTFDKIKSGDIKVVPGIKRFNNNGEVELVNGEMLDIDAVVLATGYRSNVPSWLQEGEFFSKNGYPKMPFPHGWKGNSGLYAVGFTKRGLSGASSDAVKIAQDIGKVWKQETKQKKQRTTACHRRCISQF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04098 416 Pfam Flavin-binding monooxygenase-like 26 337 IPR020946 GO:0004499|GO:0050660|GO:0050661
Trre13g04098 416 Gene3D - 23 402 IPR036188 -
Trre13g04098 416 FunFam Flavin-containing monooxygenase 24 399 - -
Trre13g04098 416 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 25 410 - -
Trre13g04098 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 185 203 - -
Trre13g04098 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 141 159 - -
Trre13g04098 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Trre13g04098 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 181 205 - -
Trre13g04098 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Trre13g04098 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 142 150 - -
Trre13g04098 416 SUPERFAMILY FAD/NAD(P)-binding domain 182 393 IPR036188 -
Trre13g04098 416 SUPERFAMILY FAD/NAD(P)-binding domain 25 284 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04098 Trre-Chr13 48850285 48852097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04098 K11816 - gmx:100819987 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04098 13 48850285 48852097 Trre13g04098 13 48850285 48852097 ECH