Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04004 ATGGCGAATAAACCGTTTCTCTTCTTCTCCGTTCTCCTTACGTTTCTCGCCGTTACCGGAGGAGATTCCGGCGAAACCTCCGAACTCGACTACTCCAAACTCTCCGGCATTATTATCCCTGGCTTCGCTTCTACTCAGCTCCGAGCATGGTCTATTCTTGACTGTCCTTACTCTCCTCTCGATTTCAATCCTCTCGATTTAGTTTGGCTCGATACTACAAAACTTCTTTCTGCTGTGAATTGTTGGCTTAAGTGCATGTTGTTAGACCCTTACAATCAGACAGATCACTCTGATTGTAAGTCCCGTCCTGATAGCGGTCTTTCTGGAATTACTGAACTCGATCCAGGTTATATAACAGGACCGCTTTCGTCTGTATGGAAAGAATGGATTAAGTGGTGTATTGAATTTGGCATAGAAGCTAATGCAATAATTGCTGTTCCTTATGATTGGAGACTGTCACCGTCTATGCTTGAAGAACGAGACCTTTACTTCCATAAACTTAAATTGACATTTGAGACTGCTTTCAAACTTCGAGGTGGCCCCTCTTTAGTTTTTGCCCATTCATTAGGCAATAATGTTTTTCGTTATTTCTTGGAGTGGTTGAAGCTAGAAATTGCACCAAAACATTATATCGAATGGCTGGATCAACATATTCATGCCTATTTTGCTGTTGCTGCTCCCCTTCTGGGTGCAACTGAAACTATTGAAGCAACACTTTCTGGATTCACATTTGGTCTTCCAGTATCTGAGGGAACAGCTCGATTGATGTTCAACTCATTTGCTTCGTCATTGTGGATGATGCCTTTTTCCAAGTATTGTAGAACAAGTAATAAATATTTTAAGCATTTTTCTGGAGAAAAGCAAGCAGGTACCCATACATATCACTGTGAAGAGGAGGAGTTTAAGTCAAACTTATCTGGATGGCCAACTAAGATAATTAACATTGAAATTCCCTCAACCCGAGGATTTGATGCATATCCCTCAATTTCAGAAATACCTGAGGCCAACTTGTCCGGAATGGAATGTGGATTACCTACTCAATTATCTTTCTCAGCTCGTGAAATAGCAGATGGCACCTTTTTCAAGGCAATTGAAGATTATGACCCAGACAGCAAGAGGCTCTTGTACCAGTTAGAGAAATCATATCTTGGCGATCCTGTTCTTAATCCACTTACACCTTGGGACCGACCACCAATAAGAAATGTCTTCTGCATTTATGGCACTAATTCAAAGACAAAGGTTGGTTACTACTTTGCCCCTAGTGGCAAGCCGTACCCTGATAACTGGATCATTACGGATGTCGTTTCTGAGTATGAAGGAACTCTAGTCTCAAGGTCAGGGAATCTGGTTGAAGGGAACCCTGGAGCTATAAGTGGTGATGAGACGGTTCCATACAACTCCCTTTCCTGGTGCAAAAACTGGCTGGGACCAAAGGTGAACATCACAAGAGCTCCTCAGCCAGAGCACGATGGCTCAGATGTACAGATTGATTTGAATGTGGAACATCACTATGAAGAAGATATTGTTCCAAACATGACTAGACTTCCTAGGGTTAAGTACATAACATATTATGAAGATTCTGAAAGTCTTCCAGGAAAGAGGACAGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATTGTTAGATCATCGGTGCTTATGAGGGAATTATGGCTTGAGATGTGGCGTGATATACATCCTGATGCAAAATCAGAGTTTGTCACAAAAGCTAAGCGTGGACCTTTAAGAGATGAGGACTGCTATTGGGATTATGGGAAAGCTCGCTGTGCATGGCCAGATTATTGTGAATATAGGTATGTTTTTGGTGATGTTCACTTGGGACAAAGCTGCAGGTTGAGATATACTGCAGCTGAATTGTTGTTGCATTATTTGTAA 1899 0.4186 MANKPFLFFSVLLTFLAVTGGDSGETSELDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMLLDPYNQTDHSDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLSPSMLEERDLYFHKLKLTFETAFKLRGGPSLVFAHSLGNNVFRYFLEWLKLEIAPKHYIEWLDQHIHAYFAVAAPLLGATETIEATLSGFTFGLPVSEGTARLMFNSFASSLWMMPFSKYCRTSNKYFKHFSGEKQAGTHTYHCEEEEFKSNLSGWPTKIINIEIPSTRGFDAYPSISEIPEANLSGMECGLPTQLSFSAREIADGTFFKAIEDYDPDSKRLLYQLEKSYLGDPVLNPLTPWDRPPIRNVFCIYGTNSKTKVGYYFAPSGKPYPDNWIITDVVSEYEGTLVSRSGNLVEGNPGAISGDETVPYNSLSWCKNWLGPKVNITRAPQPEHDGSDVQIDLNVEHHYEEDIVPNMTRLPRVKYITYYEDSESLPGKRTAVWELDKANHRNIVRSSVLMRELWLEMWRDIHPDAKSEFVTKAKRGPLRDEDCYWDYGKARCAWPDYCEYRYVFGDVHLGQSCRLRYTAAELLLHYL 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04004 632 Gene3D alpha/beta hydrolase 93 258 IPR029058 -
Trre13g04004 632 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 31 604 - -
Trre13g04004 632 Pfam Lecithin:cholesterol acyltransferase 66 502 IPR003386 GO:0006629|GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04004 Trre-Chr13 48192891 48201529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04004 9 632 Acyl Lipid Metabolism Gene Families AT1G04010 76.471 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04004 - - gmx:100806466 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04004 13 48192891 48201529 Trre13g04004 13 48192891 48201529 ECH