Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04001 ATGGAAGATTGTCATCCTCTATTGAGAGGTGGTAGAAGAAAAGAGAAAGGTTATAGTCATGGATTATCAACTGCTCAAATGCATGTTATGGCTACCATTTGTGACACCCTTTTTCCTTCTCTTCCATTGAACAAAGAATTTTCACAAGATGAAGGACTTTCATCTTTCTACTCAACTTCTGGTTCTCAATTCCCATTTCCTGATGAGGCTGCAGAACTATTGTTGTTGTTCAAGAAGTGTGTACCAGAAGCATATCCTTTGGTGAGGTGGATTCTATGGCTTCTATCTTTCAAATTAGGGACCCTGTTTCTTTGTACAACTCATTGCTTACATTGGAAGTGGCCTTTTGTTCTCAAATTTTCTGATATTTCTTTGAAAAAGAGGGAAGAAATTCTGAATAAATGGTCAAAGGAGAACAGTTGGGTGCCTCTAAGAGTGGTGTTTGTGGTGATCAAACTTATTTTCTTCTATACTTTGTTCACAAGGACAGATGTAAATGGCCATAATCCAATGTGGAAAGCAATAGGGTACAAGGTGGACACTAGGGAAAAGTTGAAAGCAAAGAAGAGGCCTCTCCAGGAAGGAGTAATAGAGACAACATACGAAACTAATTCTACGTTAATCCAATCCCTGAGTGAAAAAGGCCTTGAAGTCACTGAAGATGAAGAGAATAACGTGTACAAGATCAAATGCGATGTTGTCGTTGTCGGTTCTGGTAGTGGTGGAGGAGTTGCAGCTGCAATTCTTGCAAAATCCGGTCATAAAGTGATCGTCCTAGAGAAAGGAGAGTATTTTGTTTCTCAAGATTATTCTTCCTTGGAAGGTGTGTCGATGAACCAGCTATATGAATCAGGTGGAATCTTGCCGACACATGACGGTAAAATGATGATCTTAGCTGGCTCAACATTAGGGGGAGGTTCGGCTATAAACTGGGCCGCATGTGTAAGAACACCTGATTCTGTTATGAAGGAATGGTCCGAAAAATATAAACTACCGCTTTTCGCAAGCTCCGATTACCGATCTGCTATGGACTCGGTATGTAGAAGGATTGGTGTCACAGATAAATGCAACAAGGAGAGTTTTCAAAATCAAGTTCTTAGAAAAGGGTGTGAGAAAATCGGTTTAAAAATCGAATCAGTTGCAGTGAATGCTTCAGAAGATCATTATTGTGGTTCGTGCTGTTACGGTTGTAGAACAGGTGATAAAAAAGGTACCGACTCGACTTGGTTGGTTGATGCTGTAGAAAACGGCGCAGTTATCCTCACTGGATGTAAAGCTGAGAAATTCATACTAAAAGATGGAAATAATGGAACAAAGAGAAAGAATTGTTCAGGAGTGATTGCTGCAACAAGTGGGAGTAGTATGATAACAAAGAAACTTCAAATAGAATCAAAGGTAACTATTTCATCAGGTGGATCACTACTTACACCTCCTCTAATGATTTCTAGTGGACTACAAAATCGAAACATCGGCAAGAACCTTCATCTCCATCCTGTTCAATTTGCCTGGGGCTATTTCCCAGAAGACGAAAACTTAAGTGGTAGTAACTATGAAGGAGGAATCATAACTTCTATACACAAAGTACTTGCAGAAAATCTCACACCAAAAATCATTATAGAAGCACCTGCTCTCGGACCAGGATCATTTTCAGCCTTGGTTCCATGGAACTCGGGGCGTGATATTAAAGATAGATTGGCGAAATATTCAAGAACTGCTAACCTTTTTGCATTGGTTAGAGACAAAGGATCAGGAGAAGTAAAAGGTGAAGGAAGAATTTCTTATAGACTTGATCAAATGGACAAAGAAAATCTTAGAGTTGGATTAAGGAAGTCTTTAAGGATATTGGTTGCGGCGGGAGCTGTAGAAGTTGGAACTTATAGAAGTGATGGACAAAGAATCAAATGTAAAGGGATAAAAGAAGAAGATTTTGAGGAGTTTCTAGATACGGTTACGGTTGTTGGGGGTCCGCGGTCCCGAGGTGAACTATGGAATGTGTTTAGTTCTGCTCATCAAATGGGAAGTTGTAGAATGGGTGGCAATGAAGAAGAGGGTGCAGTTGATGAAAATGGAGAATGTTGGGAAGCAAAAGGGTTGTATGTGTGTGATGGAAGTGTTTTGCCTAGTGCTGTTGGTGTTAATCCTATGGTAACCATTCAATCTACAGCATATTGTATTGCTAGTAAAATTGCAGAATCACTTAAGAAAAAGTAG 2211 0.3976 MEDCHPLLRGGRRKEKGYSHGLSTAQMHVMATICDTLFPSLPLNKEFSQDEGLSSFYSTSGSQFPFPDEAAELLLLFKKCVPEAYPLVRWILWLLSFKLGTLFLCTTHCLHWKWPFVLKFSDISLKKREEILNKWSKENSWVPLRVVFVVIKLIFFYTLFTRTDVNGHNPMWKAIGYKVDTREKLKAKKRPLQEGVIETTYETNSTLIQSLSEKGLEVTEDEENNVYKIKCDVVVVGSGSGGGVAAAILAKSGHKVIVLEKGEYFVSQDYSSLEGVSMNQLYESGGILPTHDGKMMILAGSTLGGGSAINWAACVRTPDSVMKEWSEKYKLPLFASSDYRSAMDSVCRRIGVTDKCNKESFQNQVLRKGCEKIGLKIESVAVNASEDHYCGSCCYGCRTGDKKGTDSTWLVDAVENGAVILTGCKAEKFILKDGNNGTKRKNCSGVIAATSGSSMITKKLQIESKVTISSGGSLLTPPLMISSGLQNRNIGKNLHLHPVQFAWGYFPEDENLSGSNYEGGIITSIHKVLAENLTPKIIIEAPALGPGSFSALVPWNSGRDIKDRLAKYSRTANLFALVRDKGSGEVKGEGRISYRLDQMDKENLRVGLRKSLRILVAAGAVEVGTYRSDGQRIKCKGIKEEDFEEFLDTVTVVGGPRSRGELWNVFSSAHQMGSCRMGGNEEEGAVDENGECWEAKGLYVCDGSVLPSAVGVNPMVTIQSTAYCIASKIAESLKKK 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04001 736 Gene3D - 215 529 IPR036188 -
Trre13g04001 736 PIRSF Lg_Ch_AO 8 736 IPR012400 GO:0046577
Trre13g04001 736 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 18 736 - -
Trre13g04001 736 Pfam GMC oxidoreductase 232 499 IPR000172 GO:0016614|GO:0050660
Trre13g04001 736 Pfam GMC oxidoreductase 591 724 IPR007867 GO:0016614
Trre13g04001 736 Gene3D - 627 733 IPR036188 -
Trre13g04001 736 SUPERFAMILY FAD/NAD(P)-binding domain 229 735 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04001 Trre-Chr13 48145389 48148799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04001 5 736 Acyl Lipid Metabolism Gene Families AT4G28570 57.335 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04001 K17756 - gmx:100808951 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04001 13 48145389 48148799 Trre13g04001 13 48145389 48148799 ECH