Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03999 ATGGCGATGGCGGGTTTGTATCGTCGTCTTCTTCCTTCTCCACCTTCTGTTGATTTTGCTTCCTCTCATGGCAAGCAACTTTTTCTTGAATCGATTCAAAACGGAACAATGGAAGGTTTTTATAGATTAGTCTCTTATTTTCAAACTCAATCTGAACCTGCTTTCTGTGGACTCGCCAGTCTCTCTATGGTTCTCAATGCTCTTGCCATTGATCCTGGCAGAAAATGGAAAGGACCTTGGAGATGGTTTGATGAATCCATGTTGGACTGTTGCGAACCTTTAGAAACGGTCAAAGCTAGAGGTATTTCATTTGGGAAACTTGTATGCTTGGCTCATTGTGCTGGAGCCAAAGTTGATGCCTTTCATGCAAGTCAGAGCAGCATAAATGATTTTCGTAAATATGTCATTAAGTGTTCAACTTCTGATGACTGTCATGTAATATCATCATACCACAGAGCTGCTCTCAAACAAACGGGAACTGGTCACTTTTCTCCTATTGGAGGCTACCATGTTGGAAAGGACATGGCTCTAATTTTGGATGTTGCACGTTTTAAGTATCCACCCCACTGGGTTCCTCTTAAACTTCTTTGGGAAGGCATGAATTATATTGATGAATCCACTGGACAATCCCGAGGGTTTATGCTTATATCAAGGCCGCATAGGGAACCTGGCATGCTTTATACTCTGAGTTGCAAACACGAGAGCTGGAATAGTATTGCGAAATTCTTAATGGATGATGTCCCTTTTATGTTAAAATCAGAGGATGTGAAAGACATTCATAAGGTTCTTTCAGTTATCTTCACATCACTGCCATCTAATTTTGAAGAATTCATCAAATGGGTTGCAGAGATCAGGAGACGAGAAGATGGTGATTCAAGTCTAAGTGCAGAGGAGAAAACAAGGCTCGCTGTCAAGGAAGAGGTATTGCGACAGGTGCATGAAACTAGGCTTTTCAAACACGTGTCCTCTTTTCTGTCAAGTTCTTGTGGCAGACAGACAAACGGTGACACCTTACCTGTTATTGCTGCAAGTGTTTGTTGCCAAGGAGCAGAAATTTTAGATGGAAAACTTAGCTCACCGGCGGCAGCATATTGCTGTCCAGAAACATGTACGAAATGCTGGAAAGCAGAAGATGATAAATCAATAACGATGGTTAGTGGGACTGTGGTAAATGGTAACACTGAGCAAGGGGTTGATGTTCTTATTCCTTCATCATCGGGGAAATTATGTTGCACTTGCTCTAGCAAAAAGAACATTAGTATGCACCCAGCTAGCACTGATGTGCTAACAGTGCTTATTTTGTCCTTACCATCTACAACATGGGCTGGCATCACCAATGAGAAGCTTTTGGGGGAAATACATGACTTAGTTTCAACTGAAAATCTTTCTACTTTGCTTCAAGAAGAGGTTCTGCACTTAAGAAATCAGCTACATATTCTGAAGAGATGTCAAGAGGGTAAGGTAGATGAGGATCTCGGTGCTCCTTTCTATTAG 1494 0.417 MAMAGLYRRLLPSPPSVDFASSHGKQLFLESIQNGTMEGFYRLVSYFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLETVKARGISFGKLVCLAHCAGAKVDAFHASQSSINDFRKYVIKCSTSDDCHVISSYHRAALKQTGTGHFSPIGGYHVGKDMALILDVARFKYPPHWVPLKLLWEGMNYIDESTGQSRGFMLISRPHREPGMLYTLSCKHESWNSIAKFLMDDVPFMLKSEDVKDIHKVLSVIFTSLPSNFEEFIKWVAEIRRREDGDSSLSAEEKTRLAVKEEVLRQVHETRLFKHVSSFLSSSCGRQTNGDTLPVIAASVCCQGAEILDGKLSSPAAAYCCPETCTKCWKAEDDKSITMVSGTVVNGNTEQGVDVLIPSSSGKLCCTCSSKKNISMHPASTDVLTVLILSLPSTTWAGITNEKLLGEIHDLVSTENLSTLLQEEVLHLRNQLHILKRCQEGKVDEDLGAPFY 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03999 497 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Trre13g03999 497 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 15 220 - -
Trre13g03999 497 Gene3D - 16 220 IPR038156 -
Trre13g03999 497 Pfam Domain of unknown function (DUF1984) 231 477 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Trre13g03999 497 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Trre13g03999 497 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 476 IPR040409 GO:0016756|GO:0046872|GO:0046938
Trre13g03999 497 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03999 Trre-Chr13 48127958 48131174 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03999 K05941 - gmx:547627 874.389