Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03997 ATGAACATCTTCACCAAAAAACCCACCGCTAAAGAGGCTCTTCGCGAGAGTAAACGCGAAATGACAAACGCCACTAGAGGTATAGAGAGGGAAATTGCATCATTACAATCAGAAGAAAAGAAACTTGTTGCTGAGATTAAGAGAACTGCCAAGACAGGAAACGAGGGAGCGACTAAAATTCTAGCTCGTCAGTTGATAAGACTGAGGCAACAGATTGCTAATCTTCAGGGTAGTCGAGCTCAGATGAGAGGCATAGCAACTCACACGCAGGCTATGCACGCACATTCTTCTGTTGCTGTTGGCATGAAAGGTGCTACCAAGGCAATGGCAGCTATGAATAAGCAAATGGACCCAGCAAAGCAAGCCAAAGTTATGCAGGAATTCCAGAAACAATCGGCACAGATGGATATGACTACTGACATGATATCAGATGTCATAGATGATGCCTTGGATGATGATGAAGCTGAAGAGGAGACTGAAGAGCTTACAAATCAAGTACTTGATGAAATTGGTGTGGATATTGCCTCACAGTTATCAGCAGCTCCCAAAGGTAGAGTCGCAACGAAGAATAATACTGAAAATGTCGGCAGCTCAGGAATTGATGACCTTGAGAAGCGTTTGGCGGCTCTGAGAAACCCATAA 642 0.4424 MNIFTKKPTAKEALRESKREMTNATRGIEREIASLQSEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGATKAMAAMNKQMDPAKQAKVMQEFQKQSAQMDMTTDMISDVIDDALDDDEAEEETEELTNQVLDEIGVDIASQLSAAPKGRVATKNNTENVGSSGIDDLEKRLAALRNP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03997 213 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 212 IPR005024 GO:0007034
Trre13g03997 213 MobiDBLite consensus disorder prediction 1 27 - -
Trre13g03997 213 MobiDBLite consensus disorder prediction 179 202 - -
Trre13g03997 213 Pfam Snf7 16 185 IPR005024 GO:0007034
Trre13g03997 213 Gene3D - 4 181 - -
Trre13g03997 213 Coils Coil 18 38 - -
Trre13g03997 213 MobiDBLite consensus disorder prediction 9 27 - -
Trre13g03997 213 MobiDBLite consensus disorder prediction 183 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03997 Trre-Chr13 48111302 48114373 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03997 K12192 - gmx:100306343 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03997 13 48111302 48114373 Trre13g03997 13 48111302 48114373 ECH