Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03964 ATGTCTTGCATAAGTTTAAGGCTTCCACCTGCTAGAAAGGTATGGAAAAGCTTCACTTCAAAACTTGGTAGTAAACTTCACAGCATTCGTAAATCGAAAGCGATGAAAAAACAAAGAAAGCATCAAAGTACAAAAACTATAATAAAACCATATACCAGTATCACTACCAAACAACCTAAATTTCTTGCTACTAAAAGTTTTCGCCGAAAAAAGTTGGTGACTGTTAGAAGTGTATTCTGCAGCTTTAAGAAAAAGCCTGCACCTGTTTATATTGATAAGCTCTTCAAAGAGCCTTCTTGTGATGTTGTAGGGTATTTGAAGCCAGAGGGACTAAATTACAGATCAAGAATCGAAATAGATGCGAAGATCGATGATTTTCCGAGAGGGAAGAAAGAAGTGGAAGAAGGTTCAACAAGCAGGAGATCATGTGAGAAAACCAGTTCATCATCAGATGATATGTGGGAATCAGTGGCATTAGCTTCACCACAAATGCAAGGAATTGATGAAAGAGCAGAGGAGTTTATTACTAGGTTTAGACGGCAGATGGCGGCGCAAGAGAGATTAGCAAGGAATTTGTAG 579 0.3834 MSCISLRLPPARKVWKSFTSKLGSKLHSIRKSKAMKKQRKHQSTKTIIKPYTSITTKQPKFLATKSFRRKKLVTVRSVFCSFKKKPAPVYIDKLFKEPSCDVVGYLKPEGLNYRSRIEIDAKIDDFPRGKKEVEEGSTSRRSCEKTSSSSDDMWESVALASPQMQGIDERAEEFITRFRRQMAAQERLARNL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03964 192 MobiDBLite consensus disorder prediction 129 148 - -
Trre13g03964 192 MobiDBLite consensus disorder prediction 129 155 - -
Trre13g03964 192 Pfam Cotton fibre expressed protein 166 185 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03964 Trre-Chr13 47845890 47846468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03964 - - gmx:100500419 192.2