Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03961 ATGGAGAACAAAAACCAAGAAACTCCTCTCTTCTGGGTCGAAACCTCCAACTCCGTTTCTTGCCGCCACCAATTTCAATCCGACGGTCAACTCTCCGTATTTCTTGTTCATGATTCTAGACCCTTCTATCAAAAACTTGCTTCTTCTTTCTTCAACAAATTTTTCCCATCTGGTTATCCATACAGTGTGAATGAAGGTTATCTTAGATACACGCAGTTTCGAGCTGTGCAACATGTTACTAGTGCTGCATTGTCTGTGTTATCAACTCAGTCACTTCTAATTGCTGCGGGGTTGCGGCCAACTCCTGCACAAGCAACTGCTGTTAGCTGGATTTTAAAGGATGGGATGCAACATGTAGGGAAGATAATATGTAGCAATTGGGGTGCAAGAATGGATTCTGATCCTAAACGATGGAGGTTATTAGCTGATGTGCTTTATGACATAGGCATGGGCTTGGAAGTGCTTTCTCCGTTATGCCCGCATCTTTTTCTTGAAATGGCAGGCCTAGGAAATTTTGCCAAGGGGATGGCTGTTGTTGCAGCTAGAGCAACAAGATTGCCTATATATTCTTCATTTGCTAAAGAAGGAAATCTCAGCGACCTATTTGCTAAAGGGGAGGCGTTTTCAACTCTCTGTAATGTTGTGGGAATTGGACTTGGAATTCAGTTAGCTTCTACTGTCTGTGCATCAATGCAGGGAAAGCTGGCTGTGGCTCCTCTTCTTTCAATTATACATATATACTCTGTGTCTGAAGAGATGAGAGCAACTCCCATCAATACTTTGAATCCACGAAGAACCGCAATGATCGTGACTGATTTTCTCAAGGCAGGAACCGTATCAAGCCCTGCTGACCTAAGATATAAAGAGGATCTACTTTTTCCTGTGAGACTTAAAGAAGATGCTGGAAATGTAAGAGTTGGGAAGGCTTTACACGAGGTTATTAAGCCTTCAAAGCTTGTTGAATTAAAACAAGTATTACCTAAGGAGAAGTTTCTATTAAATCGCGGGGGTAAATGCATTGACATGGTATTGAAGCAAGATGCTAGTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATTTGCTGCACAAATTGAAAGTTCTTCTCATGAGCTTAGTGCTAGTGTCCTGCAAGAGGCCTATGCGAAAATGAATGGAGTCTTTCCTGTATTTTTAAAAGAATTACAGAACAAAGGGTGGCACACCGATCGTTTTCTGGATGGAACTGGGAGCCGCTTTGCATTCTAG 1251 0.4253 MENKNQETPLFWVETSNSVSCRHQFQSDGQLSVFLVHDSRPFYQKLASSFFNKFFPSGYPYSVNEGYLRYTQFRAVQHVTSAALSVLSTQSLLIAAGLRPTPAQATAVSWILKDGMQHVGKIICSNWGARMDSDPKRWRLLADVLYDIGMGLEVLSPLCPHLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLCNVVGIGLGIQLASTVCASMQGKLAVAPLLSIIHIYSVSEEMRATPINTLNPRRTAMIVTDFLKAGTVSSPADLRYKEDLLFPVRLKEDAGNVRVGKALHEVIKPSKLVELKQVLPKEKFLLNRGGKCIDMVLKQDASGEDALRGWLVAAFAAQIESSSHELSASVLQEAYAKMNGVFPVFLKELQNKGWHTDRFLDGTGSRFAF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03961 416 Pfam Vitamin B6 photo-protection and homoeostasis 44 276 IPR006968 -
Trre13g03961 416 PANTHER RUS1 FAMILY PROTEIN C16ORF58 4 415 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03961 Trre-Chr13 47833634 47837395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03961 - - gmx:100820508 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03961 13 47833634 47837395 Trre13g03961 13 47833634 47837395 ECH