Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03960 ATGTCTTTCAGAGGTCTCAGCCGGCCAAATGCTTCATCAGGCATGGGTGTTGATGAGAACAGCAAAAACACTTTCATGGAATTGAAGCAAAAGAAGGTCCATCGTTATGTGATCTTTAAGGTTGATGAAAAGAAAAGGGAGGTTGTGGTTGAGAAGACTGGTGGTCCTGCTGAGAGCTATGATGATTTCGCTGCATCCTTGCCCGAGAATGATTGCAGATATGCTGTGTTTGACTTTGATTTTGTCACTTCTGAGAACTGTCAAAAGAGCAAAATCTTCTTCATTGCATGGTCTCCTTCAACATCACGAATCCGTGCCAAGATGCTCTATGCCACAACTAAAGAAAGGTTTAGACGCGAGTTAGATGGTGTCCATTATGAAATTCAGGCTACTGACCCTACAGAAATGGATCTCGAAGTGCTGAGGGACCGAGCTCATTAA 441 0.4354 MSFRGLSRPNASSGMGVDENSKNTFMELKQKKVHRYVIFKVDEKKREVVVEKTGGPAESYDDFAASLPENDCRYAVFDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATTKERFRRELDGVHYEIQATDPTEMDLEVLRDRAH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03960 146 Gene3D Severin 5 146 IPR029006 -
Trre13g03960 146 SMART adf_2 19 146 IPR002108 GO:0003779
Trre13g03960 146 FunFam Actin-depolymerizing factor 2 8 146 - -
Trre13g03960 146 Pfam Cofilin/tropomyosin-type actin-binding protein 22 143 IPR002108 GO:0003779
Trre13g03960 146 SUPERFAMILY Actin depolymerizing proteins 11 146 - -
Trre13g03960 146 PANTHER COFILIN-RELATED 10 145 IPR017904 GO:0015629|GO:0030042
Trre13g03960 146 CDD ADF_cofilin_like 13 145 IPR017904 GO:0015629|GO:0030042
Trre13g03960 146 ProSiteProfiles ADF-H domain profile. 12 146 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03960 Trre-Chr13 47828022 47830993 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03960 K05765 - gmx:100819975 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03960 13 47828022 47830993 Trre13g03960 13 47828022 47830993 ECH