Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03928 ATGGCCCAAGCATGTTACGACGCCTTTGATTTCGACCCATATTCAAAATATTGTGGTAGTTGCAAACACCAACACCATGAATTTTTTCCATCGTTATATCTTCCACACATAGGGTATACAGTAACACGCTACCTCTACGCCACAGCGAATGTTAACATCCCAGATTTCTTTAAAAAATCTCGATGGCCAGATAAATATTGGTCCGAACATGCAAATTGGATGGGATACATTGCCTTTTCAGATGATGAAACAACAAAACGAATAGGTCGTAGAGACATCGTTATTGCTTGGCGAGGAACCGTTACTCATGTTGAATGGGTAGCGAATCTTCAAAATTTCCTTAAACCGATTTACAAAGACATTCCTTGTCCCGACAATGATGTTAGAGTAGAAGCAGGTTTTCTCGATATGTACACCGATCGACAAACGAAAGATGGTTATTGTAAATTCTCAGCGAGGGAACAAGTCTTAGGTGAATTGAAAAGGTTGTTAGAGAAATTTCCTAATGAAGAAGTTAGTATTACATGTACGGGACATAGTTTAGGAAGTGCTATGGCAACTTTAAGTGCTTTTGATATAGCGGAAACAGGGTTAAATATTAGAGAAAATGGGGAAAAAATTCATGTTTCGGTTTTTTCATTTTCGGGACCTAGGGTTGGAAACGTGAAATTTAAAGGGAGGTTGGAATCACATTTAGGTGTTAAGGTTTTGAGGGTTCATAACAAACATGATATGGTTCCGAAGTCGCCTGGAATTTTTATTAATGAAACTTCGCCGCCGTGGTTGTTGAAGATTGCGGAGGATATTGATATTCCGTGGTGTTATACTCATGTTGGAGTGGAATTAGAATTAGACCACAAGATTTCGCCATTTTTGATTCCTGATGCGGATGCTGCATGTGCCCACAACTTGGAAGCACACTTGCATATACTCGACGGATACCATGGGAGAAATCGTGAATATGAGGCAACAACGAACAGGGACATTGCATTGGTGAATAAAGCTTGTGACTTTGTGAAAGATGAACACTCTGTGCCACCAAATTGGAGGCAAGATTTTAACAGAAACATGGTGAGGACCGAAGATGGGCGGTGGGTTCTGGCTCACCGCCCACAAGTTGTTGATATACATCATGAAGACATTGAACCTTATCTCGAGCAGATAGGCATCCTTTCACCTAATAAATAA 1188 0.4032 MAQACYDAFDFDPYSKYCGSCKHQHHEFFPSLYLPHIGYTVTRYLYATANVNIPDFFKKSRWPDKYWSEHANWMGYIAFSDDETTKRIGRRDIVIAWRGTVTHVEWVANLQNFLKPIYKDIPCPDNDVRVEAGFLDMYTDRQTKDGYCKFSAREQVLGELKRLLEKFPNEEVSITCTGHSLGSAMATLSAFDIAETGLNIRENGEKIHVSVFSFSGPRVGNVKFKGRLESHLGVKVLRVHNKHDMVPKSPGIFINETSPPWLLKIAEDIDIPWCYTHVGVELELDHKISPFLIPDADAACAHNLEAHLHILDGYHGRNREYEATTNRDIALVNKACDFVKDEHSVPPNWRQDFNRNMVRTEDGRWVLAHRPQVVDIHHEDIEPYLEQIGILSPNK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03928 395 Gene3D alpha/beta hydrolase 1 380 IPR029058 -
Trre13g03928 395 FunFam Phospholipase A1-II 3 1 377 - -
Trre13g03928 395 CDD Lipase_3 44 286 - -
Trre13g03928 395 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 1 371 - -
Trre13g03928 395 Pfam Lipase (class 3) 94 252 IPR002921 GO:0006629
Trre13g03928 395 SUPERFAMILY alpha/beta-Hydrolases 55 315 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03928 Trre-Chr13 47404270 47407366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03928 1 393 Acyl Lipid Metabolism Gene Families AT2G30550 57.286 2.76e-164 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03928 - - cam:101506071 740.725