Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03807 ATGAATTCTTTTTTAGCTGTTATTGAAGAATTTCATCCATGGTTTCTTTTGGGCTTCACAAAGACCAAGATCAAGACCCATCTTTGTGAGTTTCCTTCTTGTTTTGGAGAAAATGGTGTTCAAGTTGCAGATTCATCTTCTTCATCATCATCAAGTACCATAAAAGTACCACAAAATGTTGTCACTTGTATCTATCAATGTAAATTAAGAGGTCGTTCATGTTTGATTACTGTTTCATGGACAAAAAATTTGATGGGCCAAGGCTTAAGTGTTGGAATTGATGAATTGGGAGATCTGAAAAAAGAAGCATGTAAGAAGATTGATAGTGACAACAATGTTGGTGTTTATAATTCTGATGCAATTTTTATTGCAAAAAGAGAACATATTTTTGGGAAGAAATTTTACTGTGCAAAAGCTCAATTTTGTGACAAGGGTAAAGTACATGATGTGAGAATTGAGTGTGATGCAATTGTTGGAACTAATGAACCATGTCTTGTGATTAGAATTGATAGCAAGATAATGATGCAGGTGAAGCAATTGAAGTGGAAGTTTCGCGGTAATCAAACTATTTTGGTGGATGGTTTTCCTGTTGAAGTGTTTTGGGATGTTCATAATTGGCTGTTTGGAAATGCAACTGGAAATGCAGTTTTCATGTTTCAAACTTGTGTTTCAGCTGATAAGTTATGGTCTGGTCAATCTGTTTCTGATCCTTCTCTTTTGACTTGGGCTTATTCTCAGCAATTTAGAGATTCTCAGTTGCAAGGTCTTGGATTTTCTCTCATTTTGTATGCTTGGAAAAATGAGTAG 807 0.3494 MNSFLAVIEEFHPWFLLGFTKTKIKTHLCEFPSCFGENGVQVADSSSSSSSSTIKVPQNVVTCIYQCKLRGRSCLITVSWTKNLMGQGLSVGIDELGDLKKEACKKIDSDNNVGVYNSDAIFIAKREHIFGKKFYCAKAQFCDKGKVHDVRIECDAIVGTNEPCLVIRIDSKIMMQVKQLKWKFRGNQTILVDGFPVEVFWDVHNWLFGNATGNAVFMFQTCVSADKLWSGQSVSDPSLLTWAYSQQFRDSQLQGLGFSLILYAWKNE 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03807 268 PANTHER EXPRESSED PROTEIN 31 94 IPR008586 -
Trre13g03807 268 Pfam Plant protein of unknown function (DUF868) 57 94 IPR008586 -
Trre13g03807 268 Pfam Plant protein of unknown function (DUF868) 96 266 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03807 Trre-Chr13 46167395 46168492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03807 30 268 EF-hand Containing Proteins AT5G28150 42.157 4.43e-60 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03807 - - gmx:100796685 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03807 13 46167395 46168492 Trre13g03807 13 46167395 46168492 ECH