Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03795 ATGTTGATGATGAAAATAAACCACAATTTCCATCTTCTCTTCAATGGATTGCTAATAATTCTCAACACCTTGGCTTGTATTATTGCCTTAAGATCATGGAATATCCACCCTAAGAAGTGTAAAAAGGTAAAAACTTGGTTGAATGACAGAGATTTACCTGGCGAGGTTGGTTATGCTCTGGATGTTCCCTGGTATGCTAGCTTACCCCGGTTGGGGACAAGATTTTACCTTGAACAATATGGTGGTGAAAATGATGTTTGGATTGGCAAAACCCTTTACAGGATACTATACGTGAACAATGATGTTTATCTTGAGCTTGCAAAATTTGATTACAACAACTGTCAAGCTGTGCATTATAAAGAATGGGAAGAAGAAATTCAAAGGTGGTACTCGGAATCAGAACTAGAAGGGTTTGGTTTAAGCAAAAAGAATCTACTGTTTGCTTATTATGTAGCAGCAGCCAGCATATTTGAGCCTGAGAGGTCTCTAGAGCGACTCGCGTGGACTAAAACAGCTGCTTTGCTTCACACATTGAAGTCACATTTCAAAGATGAAGAAACTAGGAGTACATTTGTAGAAAAGTTGTTATGA 591 0.3824 MLMMKINHNFHLLFNGLLIILNTLACIIALRSWNIHPKKCKKVKTWLNDRDLPGEVGYALDVPWYASLPRLGTRFYLEQYGGENDVWIGKTLYRILYVNNDVYLELAKFDYNNCQAVHYKEWEEEIQRWYSESELEGFGLSKKNLLFAYYVAAASIFEPERSLERLAWTKTAALLHTLKSHFKDEETRSTFVEKLL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03795 196 Gene3D Farnesyl Diphosphate Synthase 114 196 IPR008949 -
Trre13g03795 196 SUPERFAMILY Terpenoid synthases 99 178 IPR008949 -
Trre13g03795 196 Gene3D - 20 45 - -
Trre13g03795 196 Gene3D - 46 111 IPR036965 GO:0010333|GO:0016829
Trre13g03795 196 Pfam Terpene synthase family, metal binding domain 104 182 IPR005630 GO:0000287|GO:0010333|GO:0016829
Trre13g03795 196 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 43 85 IPR008930 -
Trre13g03795 196 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 19 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03795 Trre-Chr13 46105484 46106546 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03795 K04120 - mtr:25499121 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03795 13 46105484 46106546 Trre13g03795 13 46105484 46106546 ECH