Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03788 ATGGAGACTCTTGTTGAAACTGATGATATAACCTCGGATATATACCTTTCACTGGGGCTTACAGAATTGGATAAAGGTGTTGGAGTTCCACGGGTTTTGTCACTTCTTTCCTCACTTCTTGAGAGATCAGTTCAGAAAAATGAAATCCTATTGGAGACAAAACATATAGAAGATGTCGTTACAGTTTTTCATGGTTTAAGAGCACCTACTCTGAGTGTTCGTAAGTACATTGATCGTATCTGTAAGTACTCGGGTTGCAGCCCGTCTTGTTTTGTTGTAGCACACATATACATGGATAGATTTCTTCAGCACACGGAGATCAAATTGACCTCACTTAATGTGCACCGGCTTCTCATAACCAGCATTATGCTAGCAGCAAAGTTTATGGATGATGCATTCTTCAACAATGCTTACTATGCTAAAGTTGGAGGAGTAAGCACTTCTGAATTAAACAGATTGGAAATGAGCTTTTTGTTTGGTATAGATTTTAGACTTCAGGTTAGTGTAGACACATTTGGAAGTTATTGTTTACAATTGGAAAAAGAAGGTTCTGAAACACTTCAAATTGAAAGGCCAATGCAAGCTTGTAGAATTAAAGAAAGTTGGTCAAACAAAGAAGACCCTTCATGTGCTTCCACAATTGCAAGATGA 651 0.3794 METLVETDDITSDIYLSLGLTELDKGVGVPRVLSLLSSLLERSVQKNEILLETKHIEDVVTVFHGLRAPTLSVRKYIDRICKYSGCSPSCFVVAHIYMDRFLQHTEIKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYAKVGGVSTSELNRLEMSFLFGIDFRLQVSVDTFGSYCLQLEKEGSETLQIERPMQACRIKESWSNKEDPSCASTIAR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03788 216 Pfam Cyclin 58 165 IPR013922 GO:0000079|GO:0019901
Trre13g03788 216 SUPERFAMILY Cyclin-like 75 165 IPR036915 -
Trre13g03788 216 PANTHER UNCHARACTERIZED 23 207 IPR013922 GO:0000079|GO:0019901
Trre13g03788 216 SMART cyclin_7 75 159 IPR013763 -
Trre13g03788 216 Gene3D - 25 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03788 Trre-Chr13 46038198 46039085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03788 - - gmx:100805926 358.607