Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03780 ATGAGCAGTGTCTCCAAGATGGCGGAGATGGATCCCGCCGAGATCTACACAGCATCAGACACCATGGATTCCGCCGCAATCTTTCACACCATCAACGACGTCGTAGCGTTCGTTCTTTACATGCACCAACAAATCCCCTCAACAGTGCAAGATATGAGCGTTGAGTTCGATTCAATGCATTCTGAGTTTAAGCAACTGGAGATAGATATGGGAAGTGAAGTGAAGGCGTCGTTTAGGAGGAAGTATGTGAGTAGAATGAGGGAAATCAAAGTAGGAATAAAGAGATTAGATAAATTGATGAGTTCTCTTTCGAATTTACAAACTGCACTTAAATTGATGATCAATGAGGTTCGTACCATAGGTGGAGTTGTTTTGGCTCTTGGAGGTAGCTCCCTTAGACCTCAGAATGTTTATGTATTGGAATTTCCATGTCGAATTGATGTTTCCAATGTCGAGGATGATTTTGCTAGGAGTAAAGCTGCAGAGGCTCTTTCAAGAAAGGCAATTCGAACGTTGATATCAAAGGATGCTGGGTCTGTTACATATCCTGGTCCTAACAAACTGTTTGTGTTAATCAAGGCCCCTTCTTCTTTCAACCAGCCTCAGCATTTTCTACCCAAACGTGATTTTAAGTACAACAGAAAGATTCTGCCTCTTAGGCTACTGTTTAAGTGCCGGAACCAGGATCATGAAGTATCTACTTCTACCTCAGAAGATTTGATCTGGTTTCAATGCCGACATGTGATAAAAGGCCTTGCAATGAATGCAATGCCAGAAGAATGA 783 0.4227 MSSVSKMAEMDPAEIYTASDTMDSAAIFHTINDVVAFVLYMHQQIPSTVQDMSVEFDSMHSEFKQLEIDMGSEVKASFRRKYVSRMREIKVGIKRLDKLMSSLSNLQTALKLMINEVRTIGGVVLALGGSSLRPQNVYVLEFPCRIDVSNVEDDFARSKAAEALSRKAIRTLISKDAGSVTYPGPNKLFVLIKAPSSFNQPQHFLPKRDFKYNRKILPLRLLFKCRNQDHEVSTSTSEDLIWFQCRHVIKGLAMNAMPEE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03780 260 PANTHER MAD2L1-BINDING PROTEIN 7 258 IPR009511 GO:0005634|GO:0007096
Trre13g03780 260 Coils Coil 96 116 - -
Trre13g03780 260 Gene3D - 8 253 - -
Trre13g03780 260 Pfam Mad1 and Cdc20-bound-Mad2 binding 34 252 IPR009511 GO:0005634|GO:0007096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03780 Trre-Chr13 45937727 45940376 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03780 - - gmx:100795646 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03780 13 45937727 45940376 Trre13g03780 13 45937727 45940376 ECH