Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03693 ATGTCTAGAAAAGCAACAACTTCAAATCCTACTATAGGTCTGAGCGGATCTGGTCTTTCACATGCTTACATTCAGTATCCACCGCTTCGGTGTAATGTTCCCGGATCAACGGGATTATTTTATGACGATGGAAATAAGTTGCTACTCTCCCCAACAGCTGATCAGGTCTTTTCATGGAAATTCAGTACCTTTGATCCTCTCATTGGTCCCTCCACTGACTCAATAAGTGAAGGCCCTATTATAGCTGTTCGGTATTCTTTAGACACAAAGGTTATAGCAATCCAGCGATCAGGCAATGAGCTACAGTTTTGGGATAGAGAAACTGCGGAAACATTTAGCCATAAGTGCAGGCCAGAATCAGAAAGTATACTTGGATTTTTTTGGACCGACAGTCAACAGTGTGATATTGTTATTGTTAAGACCAATGGTCTAGACTTGTGTGCATATAAATCAGAGTCAAAATCACTCCAATTGGTGGAAACAAAGAAAGTGAATGTTAGTTGGTATGTCTACACACATGAAAGCCGCTTGGTTCTTCTTGCTTCTGGAATGCAGTGCAAGACATTCCACGGATTTCAGATTTCATCCGCAGATATTGTTCGCTTACCAAGGTTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCCGTTTTAGCAGCTGAAGATATCTTTATTGTCACTGTATATGGTAGGATATACTGCTTACAAGTTGATAGAGTTGCAATGCTACTCCATTCCTATAGGCTATATCGTGATGCAGTGATACAGCAGGGTTCTTTACCAATTTATTCCAGCAGGATTGCTGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTCTTTGCAGATTCTCGAGCACCAATATCTGCACCACTTCCTTTATTGTTAAGGGGTTTCCCCAGGTCCAGTACCACATCTCAATTTAGTGGTAGAGACAGTGAAAGTTCAGATGGTAATATTGTGAGTAGCCATGAAGCAGTTACATATGCTGATACATGGATTTTCCTAGTGCCTGACCTCGTATGCGATGTGGCCAATAAGCTATTATGGAAATTCAATTTAGACTTAGAAGCAATTTCTGCCAGTAACTCAGATGTCCCTTCAGTATTAGACTTCCTGCAGCGGCGAAAGTTGGAGGCTAACAAGGCTAAACAATTGTGCTTGGGTATAACACAGACACTTATTCTAGAGCACAGACCTGTACCTGTGGTTGCCAAGGCTATAAATGTACTAGTCACCTCTTATTCCCATTCACTTAAAACTGGTAGCTATCTAAAGGGGCTGAAACCAGAGATGACATTAAATTCTAGTGCACAAAATGCTGATACTGATGTATCTGCTATAGAAAGAGATGCAACTGGGAAATCAATCATACACGAATCTACCACTAGAGTAGACAGCGGAACTTTGGATTCTGAGGATGAATCACAGTTTGCAAATCTTAAACACAATTCAAAGGAGGCCCGTATTGGGGGTAGTGCAAACAATGAAAACTCCCCAAGTAATGAAACTCATAGTTCTTATGTTATGCAATCATCTTTACTGTCTGTGCAAGACGAGTCCCAACTTACTTCAGCAACAATTTCGCCAGATGAGATGTACAACTTTGTATTTTCTCCTGTTGATGAAGAGATGGTGGGAGACCCTTCTTACTTGGTTGCTATAATTGTTGAGTTTCTTCACAGTGCAAATTTGGAAAAGATTCGTGTGCTCCCAAATCTATATGTATTGATAATTCAACTTCTGGTGCGGAATGAACGTTATGCTGAATTGGGGTTGTTTGTCGTAAATAAGATTTTGGAGCCCTCTAAGGAAGTTGCACTTCAACTCCTAGAGTCTGGTCGTCAGAATGCGCAAACTAGGAAGCTTGGTCTGGATATGCTGAGACAGCTTGGTTTACATAATGATTATGTATTGCTTCTAGTGCAAGATGGGTACTACCTTGAAGCCTTGCGATATGCACGGAAGTACAGGGTGGATACCATCCGACCGTCGTTGTTTTTAGAAGCAGCTTTTGTATCCAATGACTCCCAACATCTTGCTGCAGTTCTAAGATTCTTTACAGATTTCCTTCCTGGCTTCAAAAACACCTCAGAGCATAATAGATACTATCGCATACTGAATGAGATGAACTCTTCCATGACTGTTTGA 2190 0.4082 MSRKATTSNPTIGLSGSGLSHAYIQYPPLRCNVPGSTGLFYDDGNKLLLSPTADQVFSWKFSTFDPLIGPSTDSISEGPIIAVRYSLDTKVIAIQRSGNELQFWDRETAETFSHKCRPESESILGFFWTDSQQCDIVIVKTNGLDLCAYKSESKSLQLVETKKVNVSWYVYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMVMAKSEANSKPVLAAEDIFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSSRIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTTSQFSGRDSESSDGNIVSSHEAVTYADTWIFLVPDLVCDVANKLLWKFNLDLEAISASNSDVPSVLDFLQRRKLEANKAKQLCLGITQTLILEHRPVPVVAKAINVLVTSYSHSLKTGSYLKGLKPEMTLNSSAQNADTDVSAIERDATGKSIIHESTTRVDSGTLDSEDESQFANLKHNSKEARIGGSANNENSPSNETHSSYVMQSSLLSVQDESQLTSATISPDEMYNFVFSPVDEEMVGDPSYLVAIIVEFLHSANLEKIRVLPNLYVLIIQLLVRNERYAELGLFVVNKILEPSKEVALQLLESGRQNAQTRKLGLDMLRQLGLHNDYVLLLVQDGYYLEALRYARKYRVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPGFKNTSEHNRYYRILNEMNSSMTV 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03693 729 Pfam Colon cancer-associated protein Mic1-like 562 702 IPR009755 -
Trre13g03693 729 MobiDBLite consensus disorder prediction 497 520 - -
Trre13g03693 729 MobiDBLite consensus disorder prediction 502 520 - -
Trre13g03693 729 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 18 724 IPR040371 GO:0010506|GO:0035658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03693 Trre-Chr13 44589008 44599450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03693 K24763 - gmx:100500389 1236.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03693 13 44589008 44599450 Trre13g03693 13 44589008 44599450 ECH