Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03680 ATGTCTTTCCCTCCCACCAAAACCACATTCCACCGCGAGTCAACTCCCGAATCCTCCGTATTTGAATCATTCCGTTACCGCAGCACCACCGCAGTGACACCAAAACAACGCTTCAAGCGACTCGCCCAACCCATATCACACTCTCCACGAATCAAAACGCCGCGTTCCAAATCACCCAAACTCACCGCCAAACCCAATCCATCATCATCATCATCAAAACCGCACATTTCATTCCAAAAAACTGAACTTTTACCCCGCGAGTTCTTTCAAATCGATGCATTAGACCTTGCCCCTCGTTTGCTCGGAAAGTTTCTTCGCAGAGACGACGTCGTTCTTCAGATTACCGAGGTTGAAGCATATAGATCAAATGATTCAGCTAGTCATGGTCGGTTTGGTATTACTCCAAGAACTGCTCCTGTTTTTGGACCGGGTGGGCATGCATATGTTTATCTTTGCTATGGTCTCCACATAATGCTGAATGTTGTTGCTGATAAAGAAGGAGTTGGATCTGGTGTTTTGATACGTTCTTGTGCCCCCATTTCTGGATTGGATGTTATTCAACAGCGCCGAGGTCAACAAACTGACAAACCTATACTTCTTACAGGCCCTGGGAAGGTTGGTCAGGCACTAGGTCTTTCAACAGAATGGTCCAATCATCCACTTTATACCCCTGGTGGTTTAGAACTCTTAGATGGTCCAGAGCCTGAAAACATATTGGTAGGTCCACGTGTTGGTATCCAGTTCGCTCTTCCAGAGCATGTCGAGGCACTGTGGAGGTTTGCCGTTGCAGGTTCCGCTTGGATTAGTGCTCCAAGAAACACTCTCAGGCCACCCTTAGAAAGTGGAGTGGTAGTAGCTTGA 861 0.4727 MSFPPTKTTFHRESTPESSVFESFRYRSTTAVTPKQRFKRLAQPISHSPRIKTPRSKSPKLTAKPNPSSSSSKPHISFQKTELLPREFFQIDALDLAPRLLGKFLRRDDVVLQITEVEAYRSNDSASHGRFGITPRTAPVFGPGGHAYVYLCYGLHIMLNVVADKEGVGSGVLIRSCAPISGLDVIQQRRGQQTDKPILLTGPGKVGQALGLSTEWSNHPLYTPGGLELLDGPEPENILVGPRVGIQFALPEHVEALWRFAVAGSAWISAPRNTLRPPLESGVVVA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03680 286 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 57 277 IPR003180 GO:0003677|GO:0003905|GO:0006284
Trre13g03680 286 SUPERFAMILY FMT C-terminal domain-like 82 275 IPR011034 GO:0003824
Trre13g03680 286 FunFam Putative 3-methyladenine DNA glycosylase 79 277 - -
Trre13g03680 286 Pfam Methylpurine-DNA glycosylase (MPG) 87 265 IPR003180 GO:0003677|GO:0003905|GO:0006284
Trre13g03680 286 Hamap Putative 3-methyladenine DNA glycosylase. 86 269 IPR003180 GO:0003677|GO:0003905|GO:0006284
Trre13g03680 286 MobiDBLite consensus disorder prediction 35 76 - -
Trre13g03680 286 Gene3D - 79 276 IPR036995 GO:0003677|GO:0003905|GO:0006284
Trre13g03680 286 CDD AAG 88 269 IPR003180 GO:0003677|GO:0003905|GO:0006284
Trre13g03680 286 NCBIfam DNA-3-methyladenine glycosylase 84 269 IPR003180 GO:0003677|GO:0003905|GO:0006284
Trre13g03680 286 MobiDBLite consensus disorder prediction 59 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03680 Trre-Chr13 44374939 44378026 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03680 K03652 - gmx:100813424 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03680 13 44374939 44378026 Trre13g03680 13 44374939 44378026 ECH