Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03679 ATGGCGAAATACGGCGAAGGAGATAAACGGTGGATCGTGGAAGAAAGACCAGACGGAACCAACGTCCACAACTGGCACTGGTCCGAAACTAACTGTCTAGAATGGTCTAGAACCTTCTTCACCAACCTTCTTTCAAATCTCGTTATTCTCAACGGCGAAGGTAACCTCTTCATCAAAACCACCACTCTCCGTAACCTCGACGGCGAAGCTTACATCAATATCCGTAAAGGGAAAATCATTCCAGGTTATGGAATTAACCTAACTGTTTCATGGGAAGGTGAAGCTAAAGATTCTGATGGAAATTCTTTGCTTAAGGTTAATGGTAGTGTTGAAATTCCTTATATCTCTGATGAAAATGCTGATGAAGATCCTGATCTTAGGGTTACTGTTGAAGATGAGGGACCGATTGGGAAGAGGATTAAGGATGCAATGTTTTCGAAAGGGAAGGGTTTGATTTTGGAGAAGGTTAGGATTTGGGTTCAGAGTATGGCTAGAGGTGGTCCTGTTAAGGAGGAATTGGATGTTAAGAAGCCGGTGAAGCAGAGTAATACTCCGGCGACAGCGGCAGTGAAGAATGATTCTGTTAAGAAGGAGAGTGTGGTGGTGGAGAAGAAGAAGAGTAAGAAGGGAAGGAAGAGTATTGTGATGAGTGAGAAGTTTAATTGTAGGGCGAAGGATTTGTTTGAGATATTGATGGATGAGAATAGATGGAAGGGTTTTACGCAGAGTAATGCTAGGATTAGTAAAGAGGTTGGTGGCGAGTTTAGTATTTTTGATGGGTCTGTTACTGGAAATAATTTGGAGTTGCAAGAAGGTAAGTTGATTGTGCAGAGATGGAGATTTGGGAGCTGGAATGATGGTGATCAATCTCAGGTGAGGCTTGTTTTTGAGGAGCCTGAACCAGGGGTTACAGTTGTTAAGCTGACACATACTGATGTACCCGAGGAAGATAGGTATGGGAATGCTACTGTGGTGGAGAACACCGAAAGAGGATGGCGGGACCTTATTTTCCAAAGGATACGTGCTGTTTTTGGTTTTGGAATTTAA 1047 0.4308 MAKYGEGDKRWIVEERPDGTNVHNWHWSETNCLEWSRTFFTNLLSNLVILNGEGNLFIKTTTLRNLDGEAYINIRKGKIIPGYGINLTVSWEGEAKDSDGNSLLKVNGSVEIPYISDENADEDPDLRVTVEDEGPIGKRIKDAMFSKGKGLILEKVRIWVQSMARGGPVKEELDVKKPVKQSNTPATAAVKNDSVKKESVVVEKKKSKKGRKSIVMSEKFNCRAKDLFEILMDENRWKGFTQSNARISKEVGGEFSIFDGSVTGNNLELQEGKLIVQRWRFGSWNDGDQSQVRLVFEEPEPGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03679 348 Gene3D - 18 177 IPR036338 -
Trre13g03679 348 Gene3D - 211 347 IPR023393 -
Trre13g03679 348 Pfam Activator of Hsp90 ATPase homolog 1-like protein 224 344 IPR013538 -
Trre13g03679 348 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Trre13g03679 348 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 164 IPR015310 GO:0001671|GO:0051087
Trre13g03679 348 Pfam Activator of Hsp90 ATPase, N-terminal 29 164 IPR015310 GO:0001671|GO:0051087
Trre13g03679 348 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Trre13g03679 348 CDD SRPBCC_Aha1 214 346 - -
Trre13g03679 348 SUPERFAMILY Bet v1-like 213 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03679 Trre-Chr13 44370332 44372847 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03679 K26216 - gmx:100784184 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03679 13 44370332 44372847 Trre13g03679 13 44370332 44372847 ECH
Trre13g03679 13 44370332 44372847 Trre1g02188 1 17433557 17435857 PCT