Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03678 ATGGATCCTATTCATGATTCTGAACAGCTTGATCAAATTCTTGTTCATGCTCAACAAAACTCTCATCTTGTTATTATTGACTGGTTGGCTCTTTGGTGCAGGAAGTGCATCTATTTAAAGCCCAAGTTGGAAACATTAGCAGCTCAATTTGACACCAAAGCCAAATTTTATTATGTGGATGTCAATAAAGTACCTCAGAGTCTAGTTAAGCGTGGCAACATCTCTAAAATGCCAACAATTCAGCTTTGGAAAGATGGAGAGATGAAATCAGAAATAATTGGAGGCCATCAAGGCTGGCTGGTCATTAAAGAAGTTAGAGAAATGATTGAAGATTATTTATGA 342 0.3684 MDPIHDSEQLDQILVHAQQNSHLVIIDWLALWCRKCIYLKPKLETLAAQFDTKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKSEIIGGHQGWLVIKEVREMIEDYL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03678 113 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 1 112 IPR044253 GO:0009570
Trre13g03678 113 CDD TRX_family 8 110 - -
Trre13g03678 113 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Trre13g03678 113 Gene3D Glutaredoxin 1 112 - -
Trre13g03678 113 Pfam Thioredoxin 18 97 IPR013766 -
Trre13g03678 113 SUPERFAMILY Thioredoxin-like 4 111 IPR036249 -
Trre13g03678 113 FunFam Thioredoxin 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03678 Trre-Chr13 44366388 44368094 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03678 - - adu:107492880 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03678 13 44366388 44368094 Trre13g03678 13 44366388 44368094 ECH