Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03659 ATGATGGTCAAAGGTATCCAACTTCAGCTATGCGGGTTTGTCAGCCAACGCTGGAATCTAAAACCAATAACAACCTCTCTTTCATTCTCATCGATTTCCCTAATCTCATACCCTAACCCTAACCCTAACCCTTCTCTCAAACTCTTCCTTCCCACCCCTCGCACCACTCGATTCGCACCTTTTCGCGCTTCATCATCGCTTCAATCTTCTGGGAATGTTCGAAGTATCAAATTCTGTCAATGGTGTGGTGGTTCTACCAAACATGATATACCTGATGGAGAAGAAAAGCTGAGAGCTATATGTACACTTTGTGGGAGGATTGCTTATCAGAATCCCAAAATGGTAGTTGGTTGCCTCATTGAACACGATAATAAGGTCCTCCTTTGCAAGAGGAATATCCAACCATCTCACGGTCTTTGGACGCTTCCTGCTGGTTATTTGGAAATTGGAGAGTCAGCTCTGGAAGGTGCCATGAGAGAAACAATGGAGGAAGCAAATGCAGATGTAGAAGTAATTTCTCCCTTTGCTCAATTGGACATTCCTTTAATTGGACAAACTTACTTGATATTCTTAGCAAAGCTGAAGAAGCCCCATTTTTCACCCGGTCCAGAATCATCAGAATGCCAACTTTTTTCACTTGATGATATACCTTTTAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTGAGTTTGTATGTTGAGGATATCAAGGCCGGCAAGCCCAAATTTCATTATGGAACCATTAACAAAAGGCCTGGTACAAGTCCTTCTGATATTCGTGCCTACACACTGGATCATCACATGCACACATGA 816 0.424 MMVKGIQLQLCGFVSQRWNLKPITTSLSFSSISLISYPNPNPNPSLKLFLPTPRTTRFAPFRASSSLQSSGNVRSIKFCQWCGGSTKHDIPDGEEKLRAICTLCGRIAYQNPKMVVGCLIEHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESALEGAMRETMEEANADVEVISPFAQLDIPLIGQTYLIFLAKLKKPHFSPGPESSECQLFSLDDIPFNSLSFSSMVVTLSLYVEDIKAGKPKFHYGTINKRPGTSPSDIRAYTLDHHMHT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03659 271 Pfam Nudix N-terminal 77 110 IPR029401 -
Trre13g03659 271 SUPERFAMILY Nudix 77 235 IPR015797 -
Trre13g03659 271 ProSiteProfiles Nudix hydrolase domain profile. 111 234 IPR000086 -
Trre13g03659 271 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 111 262 - -
Trre13g03659 271 Gene3D - 75 110 - -
Trre13g03659 271 ProSitePatterns Nudix box signature. 145 166 IPR020084 GO:0016787
Trre13g03659 271 PANTHER NUDIX HYDROLASE 23 78 265 - -
Trre13g03659 271 Pfam NUDIX domain 115 216 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03659 Trre-Chr13 44178506 44181912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03659 K18453 - gmx:100808417 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03659 13 44178506 44181912 Trre13g03659 13 44178506 44181912 ECH