Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03627 ATGCAAGGAGGATCAAAGAAAACGGGAGAGAGCATTAAGGAAACAGCTGCCAACATTGGTGCTTCAGCCAAATCTGGCATGGAGAAGACCAAAGCCAACGTCCAAGAGAAGACAGAAAGGATGACGTCACATGACCCATTGCAAAAGGAAATGGCAACCCAAAAGAAAGATGCAAGGGTTAATCAGGCTGAGCTGGATAAACAGGCGGCGCGTGAACACAACGCTGCGGCTACTGCCGGACACATTGGGCAGGGTGGACACCACACCACTGGAACTAATCCAAATGCCACGGGGTATGGGACCGGTGGTACTTACCGTTAA 321 0.5078 MQGGSKKTGESIKETAANIGASAKSGMEKTKANVQEKTERMTSHDPLQKEMATQKKDARVNQAELDKQAAREHNAAATAGHIGQGGHHTTGTNPNATGYGTGGTYR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03627 106 MobiDBLite consensus disorder prediction 85 106 - -
Trre13g03627 106 MobiDBLite consensus disorder prediction 1 106 - -
Trre13g03627 106 Pfam Late embryogenesis abundant (LEA) group 1 10 78 IPR005513 GO:0009793
Trre13g03627 106 MobiDBLite consensus disorder prediction 30 71 - -
Trre13g03627 106 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 10 98 IPR005513 GO:0009793
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03627 Trre-Chr13 43834659 43835486 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03627 - - gmx:547828 134.42