Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03592 ATGGATCCGGCAGAACGTAGGTACTTGGAAGAGGAGGATTCCTCACTCATGAAAACTTTTAAGGGTGCAACAACTGGTTTAGCTGCTGGAACTATCTGGGGTACTGTCGTTGCCACCTGGTATGATGTTCCTCGTGTTGAGAGAAGTGTTGCTCTTCCTGGGCTGTTAAGAACTTTCAAGATGATGGGAAGCTATGGAGTGACCTTTGCTGCCATCGGAGGAGTTTACATAGGTGTGGAACAGTTGGTGCAGAACTATAGGATGAAAAGGGATCTTGTAAATGGTGCTGTTGGTGGATTTGTTGCTGGTGCAACTATTCTGGGTTACAGAGGAAGGAGCATCTCAACAGCAATTTCAGCCGGATCAGCATTGGCATTCACATCTGCTGTCCTTGATTTTGGCGGCCAGACATTAAAACATGATGAGGGGAGGGAGTATGCTGCATTAACTACAAAGAAAAGATCCAGTAACGACGCATAA 480 0.4604 MDPAERRYLEEEDSSLMKTFKGATTGLAAGTIWGTVVATWYDVPRVERSVALPGLLRTFKMMGSYGVTFAAIGGVYIGVEQLVQNYRMKRDLVNGAVGGFVAGATILGYRGRSISTAISAGSALAFTSAVLDFGGQTLKHDEGREYAALTTKKRSSNDA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03592 159 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 12 155 IPR039175 GO:0042721|GO:0045039
Trre13g03592 159 Pfam Tim17/Tim22/Tim23/Pmp24 family 17 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03592 Trre-Chr13 43602174 43605390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03592 K17790 - gmx:100499840 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03592 13 43602174 43605390 Trre13g03592 13 43602174 43605390 ECH