Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03526 ATGGCACCAAGATGGAAAGGAAAAGATACAAAATCAAAAAAGGATGCTGAAGCTGAGGCACTTAGAGAACCCATGTCAACGATTATATCACAGCTTCAGTCTTCTTTAGTTCAATCAAATACTTGCGGATTTCTCTCTGATAATTGTGTACACTTAGCAGTGCAAACAGAACAACTTGACCTGCTTGATAAAGCATGCTTTGGTCGACCTGTGAGAACAGTTGAAAAGGACATGTACTGGTTTCAATTTACCTTGGAGGAAGCATTCTACCTATGTTATTTCTTGAAATGCATCAAGATTAATGGTGGTGCTGATACTGGTCCCTCAAATGATGAACAACTGTGGCGTTACTTCAAGTCCAAGAAAGAAGCATTCCCTTGTTTCTACAAGGCTTATTCTCACCTTCGAATGAAAAATTGGGTAGTGAGGTCTGGAGCTCAGTATGGTGTAGACTTCATTGTCTATCGCCATCATCCGGCTCGGGTGCATTCTGAGTACGGTGTACTTGTTCTATCACATGACAATGATGATGATGATCTAAATGGAAGATTAATAGTATGGTCTGATGTTCATTGCTCAACTCGACTTCTAGGAAGTGTTGCAAAAACCTTATTGGTTTTGTACATTAATAAAAATGGTCACAGTGATGAGTCTCTATTATGTTTGGCAAACTATACCATTGAAGAACGTACAATCTCTAGATGGAGTCCAGAACAATGCCGTGAAAGATCCATATAG 738 0.3943 MAPRWKGKDTKSKKDAEAEALREPMSTIISQLQSSLVQSNTCGFLSDNCVHLAVQTEQLDLLDKACFGRPVRTVEKDMYWFQFTLEEAFYLCYFLKCIKINGGADTGPSNDEQLWRYFKSKKEAFPCFYKAYSHLRMKNWVVRSGAQYGVDFIVYRHHPARVHSEYGVLVLSHDNDDDDLNGRLIVWSDVHCSTRLLGSVAKTLLVLYINKNGHSDESLLCLANYTIEERTISRWSPEQCRERSI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03526 245 Pfam tRNA intron endonuclease, catalytic C-terminal domain 129 213 IPR006677 GO:0000213|GO:0006388
Trre13g03526 245 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 3 74 IPR006676 GO:0000213|GO:0006388
Trre13g03526 245 Pfam tRNA intron endonuclease, N-terminal domain 43 102 IPR006678 GO:0000213|GO:0006388
Trre13g03526 245 SUPERFAMILY tRNA-intron endonuclease catalytic domain-like 125 213 IPR036167 GO:0006388
Trre13g03526 245 Gene3D - 124 222 IPR011856 GO:0003676
Trre13g03526 245 FunFam tRNA-splicing endonuclease subunit Sen2-1 124 221 - -
Trre13g03526 245 CDD tRNA-intron_lyase_C 129 213 IPR006677 GO:0000213|GO:0006388
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03526 Trre-Chr13 43030272 43031009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03526 K15322 - gmx:100810335 390.963