Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03495 ATGAGTATCACGTTCGCGTTCGAGTATGGCTTGAGCTTTGCAGCTCTTACAGCCACTATTTCGCATGTTGTCCTCTTCCACGGAAAAATGATAGTTGAGATGTGGAAGAAGACAACGAGTTCACTAAAAAACCAACTCGGAGATGTGCATACAAGAATTATGAAGAAAAACTATGAACAAGTCCCTGAATGGTGGTTTGTCACCATTCTGATTTTAATGTTTATGATGGCCTTAGTAGCTTGCGAAGGCTTCGGCAAGCAGCTCCAACTTCCATGGTGGGGAATCATACTTTCTCTCGCAATTGCATTAGTTTTCACCCTACCAATTGGAGTCATTGAAGCAACAACAAATATAAGAGCAGGCCTTAATGTGATCACAGAGTTGGTTATTGGTTTCATCTACCCTGGAAAGCCACTCGCTAACGTCGCCTTCAAGACATACGGCCATATCAGCATGGTACAAGCACTTGGTTTTCTCGAGGACCTCAAATTAGGCCACTATATGAAAATTCCACCAAAATCAATGTTCATTGTTGAGCTAATTGGCACAGTAGTTGCTTCATCTGTTCACTTTGGAACAGCATGGTGGCTTCTTACATCTATCGAGAACATATGCGATGAATCATTGTTGCCGAAAGGTAGTCCTTGGACATGTCCTGGTGACGACGTGTTTTACAACGCTTCCATTATATGGGGAGTAGTAGGACCAAAAAGAATGTTTACCAACGACGGCGTTTATCCTGAGATGAATTGGTTTTTCCTTATCGGTCTAATAACACCGGTTCCAGTGTGGCTTCTTTCTATCAAATTTCCTAACCACAAATGGATTAAACTCATTAACATTCCTATTATCATTGCAGGTGCATCTGATATTCCACCAGTGAGATCTGTGAATTATATTACATGGGGAATTGTTGGAATTTTCTTCAATTTCTATGTTTATAGAAAGTTTAAGGCTTGGTGGGCAAGACATACTTATATCCTTTCAGCTGGTTTAGATGCTGGAGTTGCTTTTATGGGTTTAGTTCTTTATTTTACTCTTCAATCTTATGGTATTTTTGGTCCAAATTGGTGGGGTCTTGAAGCAGATCACTGCCCTTTGGCTACATGCCCTACAGCTCCAGGTGTATATGCAGAGGGTTGTCCTGTTTCCTAA 1155 0.4104 MSITFAFEYGLSFAALTATISHVVLFHGKMIVEMWKKTTSSLKNQLGDVHTRIMKKNYEQVPEWWFVTILILMFMMALVACEGFGKQLQLPWWGIILSLAIALVFTLPIGVIEATTNIRAGLNVITELVIGFIYPGKPLANVAFKTYGHISMVQALGFLEDLKLGHYMKIPPKSMFIVELIGTVVASSVHFGTAWWLLTSIENICDESLLPKGSPWTCPGDDVFYNASIIWGVVGPKRMFTNDGVYPEMNWFFLIGLITPVPVWLLSIKFPNHKWIKLINIPIIIAGASDIPPVRSVNYITWGIVGIFFNFYVYRKFKAWWARHTYILSAGLDAGVAFMGLVLYFTLQSYGIFGPNWWGLEADHCPLATCPTAPGVYAEGCPVS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03495 384 Pfam OPT oligopeptide transporter protein 1 346 IPR004813 GO:0035673
Trre13g03495 384 PANTHER ISP4 LIKE PROTEIN 1 383 IPR004648 GO:0055085
Trre13g03495 384 NCBIfam OPT family oligopeptide transporter 5 348 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03495 Trre-Chr13 42608665 42609819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03495 1 383 Organic Solute Cotransporters AT4G26590 66.146 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03495 - - gmx:100820498 702.205